Vibrio tapetis subsp. tapetis: A1684
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Entry
A1684 CDS
T05424
Symbol
xthA
Name
(GenBank) exonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
vta
Vibrio tapetis subsp. tapetis
Pathway
vta03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A1684 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vta03400
]
A1684 (xthA)
Enzymes [BR:
vta01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
A1684 (xthA)
DNA repair and recombination proteins [BR:
vta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
A1684 (xthA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
YozE_SAM_like
Exo_endo_phos_2
FTSW_RODA_SPOVE
Motif
Other DBs
NCBI-ProteinID:
SON49663
UniProt:
A0A2N8ZCP8
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All DBs
Position
A:1769853..1770659
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AA seq
268 aa
AA seq
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MKVISFNINGLRARLHQLQAVIDKHDPDVIGLQEIKVHDEAFPIEDVEAMGYKVYFHGQK
AHYGVAMLCKQAPISVQKGFPTDNDEHQKRMIMATFEQENGEKVTVLNGYFPQGDNISHE
TKFPYKEQFYKDLMTYLNDHHTNEEQLIIMGDINISPIDLDIGIGAPNAKRWLKTGKCSF
QPIEREWLQTLKDWGFEDTFRNLHPEVDDQFSWFDYRSKGFPDNRGLRIDVVMATPGLAK
KCTEAGIDYELRGIEKPSDHAPIWSTFK
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcatcagctttaatatcaatggcctacgcgcacgcctgcatcaacttcaagca
gtcatcgataaacacgatccagacgtaatcggtctgcaggaaatcaaagtacacgatgaa
gcttttccaatcgaagatgttgaagcgatgggatacaaagtctacttccatggtcaaaaa
gcccattacggtgtcgctatgctgtgtaaacaagcgccaatttcagtgcaaaaaggcttc
cccactgacaacgatgaacatcaaaaacgcatgatcatggccaccttcgagcaagaaaat
ggcgagaaggtcaccgtactaaatggttatttccctcaaggtgataacatcagtcacgag
actaagttcccttataaagagcaattttataaagacttaatgacctatttaaatgaccat
cacaccaatgaagaacaattgatcatcatgggggatattaatatcagcccgatcgattta
gacattggtattggggctccaaatgccaagcgctggctgaagacgggtaaatgttctttc
caaccaatcgaacgtgagtggttacagactctaaaagactggggctttgaagatacattc
cgtaacttgcacccggaagtagacgatcagttctcgtggtttgattatcgctctaaaggc
tttccagataaccgtggactgcgtattgatgtggttatggcgacacctggtctagctaag
aaatgcactgaagctggcattgactatgaattacgcggtattgaaaaaccgtcagatcac
gcgcctatttggtctacgtttaaataa
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