Vagococcus teuberi: BHY08_03900
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Entry
BHY08_03900 CDS
T04578
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
vte
Vagococcus teuberi
Pathway
vte03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BHY08_03900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vte03400
]
BHY08_03900
DNA repair and recombination proteins [BR:
vte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BHY08_03900
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BHY08_03900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
RsgA_GTPase
AAA_29
nSTAND1
AAA_21
nSTAND3
AAA_23
AAA_22
AAA_33
AAA_14
AAA_25
APS_kinase
AAA_24
ATPase
NACHT
MMR_HSR1
Viral_helicase1
cobW
NB-ARC
DUF87
RNA_helicase
PRK
Septin
NTPase_1
MeaB
DnaJ_CXXCXGXG
FtsK_SpoIIIE
T2SSE
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
APB31045
UniProt:
A0A1J0A524
LinkDB
All DBs
Position
813916..816738
Genome browser
AA seq
940 aa
AA seq
DB search
MANDKIVIHGARAHNLKNIDVTIPRDKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLS
SYARQFLGQMDKPDVDSIDGLSPAISIDQKTTSKNPRSTVGTVTEINDYLRLLFARVGEP
ICPNDGTKISSQSPEQMTDKLLELEERTKIQILAPLIRGKKGQHKKVFEKIKKDGFVRVR
VDGKTYDISEVPELEKNKKHDVEIIVDRIVIKDGVRSRLFDSLELALRLADGYVLVDIMD
QEEMLFSEHYACPYCGFTVGDIEPRLFSFNTPFGACPECDGLSVKLEVDADLVVPDETKT
LREGAIAPWNPISSNYYPNMLEQACEQFGIDFDIPFKDLTKEQKELLFRGSGEKTFHFHY
KNEFGGVRDVDIPFEGILTNINRRYHETNSDYTREQMKLYMTELTCETCQGYRLNKEALS
VKIDGKHIGEISELSVNHSLNYMSELNFGEQDTMISQPILKEIRDRLSFLENVGLGYLTL
SRSAGTLSGGEAQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNNRLIDSLKKMRDLGNT
LVVVEHDEDTMRAADYLIDIGPGAGEQGGQIISAGTPEEVEKDKNSLTGQYLSGRRKIDV
PKERRKGNGESVKITGAKENNLKNLSVEFPMGKFVAVTGVSGSGKSTLVNTILKKALAQK
INRNSAKPGKFDKITGYESIEKIIDIDQSPIGRTPRSNPATYTSVFDDIRDLFAKTNEAK
TRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCHGQRYNSETLEVRYKG
KNIAEILEMTVEDAVEFFQAIPKIHRKLQTIVDVGLGYVKLGQSATTLSGGEAQRMKLAS
ELHKRSSGKNFYILDEPTTGLHTEDISRLLEVLNRLVDSGNTVLVIEHNLDVIKTADYVI
DLGPEGGEGGGTIIATGTPEDIIKVEESYTGYYLKEIMEC
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgacaaaatagtaatacatggtgcaagagcacataatttaaaaaacatagat
gtaacgattccaagagataaactcgtcgtgattacggggctttctggctcaggaaaaagt
tcattagcatttgacacgttatacgctgaagggcaacgtcgttatgtcgaaagtttgtcc
tcatacgcacgacaatttttagggcaaatggacaagccagatgttgatagtattgatggg
ttgagtccagcaatttcaatcgaccaaaaaacaaccagtaaaaatccacgatcaacggtt
gggaccgtcacagagataaatgattatttaagactattatttgctcgagtaggtgagcct
atttgtccaaatgatggcacgaaaattagtagtcagtctccggaacaaatgacagataag
ttgttagagttagaagaaagaacgaaaattcaaattctagcaccactcattcgtggaaaa
aaaggacaacacaaaaaagtatttgaaaaaatcaaaaaagatgggtttgtccgagtaaga
gttgatgggaaaacctatgacatttctgaagtgccagagttagaaaaaaataaaaagcat
gatgttgaaattatcgttgaccgtattgtgataaaagatggggttcgctcaagattattt
gactcacttgaactggcattacgattagcagatggctatgtattggttgatattatggat
caagaagagatgctatttagcgaacattatgcatgtccttattgcggctttacagttggc
gatattgagcctcgattgttctcatttaatacaccatttggagcgtgtccagagtgtgat
ggattgagtgttaaattagaggttgatgcagacttggttgttccagatgagacgaaaaca
ttacgtgaaggggcaattgcaccgtggaatccaatcagctcaaattattaccccaatatg
ttagagcaagcttgcgagcaatttggcattgattttgatataccatttaaagatctgact
aaagagcaaaaggaattattatttagaggatcaggagaaaaaaccttccattttcattat
aaaaacgaatttggtggcgtgcgtgatgttgatattccatttgaagggattttgactaat
ataaatcgccgttatcacgaaacaaatagtgattacacgagagaacaaatgaagctatat
atgactgaattaacgtgtgaaacgtgtcagggctatcgtttaaataaagaagctttatca
gtgaaaatagatggaaaacatattggagaaatcagtgaattatcagtgaatcattcgtta
aactatatgtctgagctaaactttggcgaacaagatacaatgatttcacaaccaatttta
aaagaaattagagatagattgagtttcttagaaaacgttggattaggctatttgactctt
agccgttcagctggaacactgtctggtggagaagcacaacgtattcgtttagcaacccag
attggttcaaatctttcaggggttttatacattttagatgagccatctattgggttacat
caacgagacaataatcgtttgattgattcattgaaaaagatgcgtgatttaggcaataca
ttagttgttgtggaacatgatgaagatacaatgagggcagctgattatttaattgacatc
ggacctggagcaggagagcaaggtggacaaattatttcagctggcacgcctgaagaagtg
gaaaaagataaaaattcattgacaggtcaatatttatcgggtaggagaaaaattgacgtg
ccgaaagaacgtcgtaaaggtaatggagaaagtgtaaaaattactggagcaaaagaaaat
aacttgaaaaatctatctgttgagtttccaatggggaaatttgtcgcggttactggtgtg
tctggttctggaaagagtacattggttaatacgattttaaagaaagctctggctcaaaaa
attaatcgtaattcagctaaacctggtaagtttgataagattacaggctatgaatcgatt
gaaaaaatcattgatattgaccaaagtccgattggacgaacaccaagaagtaatccagca
acttatacgagtgtgtttgatgatatacgtgatttatttgctaaaacaaatgaagctaaa
acacgtggttataaaaaaggtcgtttcagttttaatgtgaaaggcggaagatgtgaagca
tgtcgaggtgatggaatcatcaaaatcgaaatgcatttcttaccagatgtttatgtacca
tgtgaagtgtgtcatggacaacgctataattctgaaacactagaagttcgatataaagga
aaaaacattgctgagattttagaaatgacagtggaagatgccgtggaatttttccaagca
attcctaaaattcatcgaaaacttcaaacgattgttgatgtcggacttggttatgtcaaa
ctaggtcaatcagcaactaccctatctggtggggaagcgcaacgtatgaagttagcaagt
gagttacataaacgctcgtcaggtaaaaatttctatatattagatgaaccaacaacaggt
cttcatacagaagatattagtcgacttctagaagtattgaatcgtttagtagatagtggc
aatacagtccttgttattgaacataatctagacgtcataaaaacagcagactacgtcatt
gatttagggccagaaggtggagagggcggtggcacgatcattgcaactggaacacctgag
gatattattaaagtagaagaaagctatacaggctattatttaaaagaaattatggaatgt
tga
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