Vibrio tubiashii: IX91_01300
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Entry
IX91_01300 CDS
T03445
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
vtu
Vibrio tubiashii
Pathway
vtu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vtu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IX91_01300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vtu03021
]
IX91_01300
03400 DNA repair and recombination proteins [BR:
vtu03400
]
IX91_01300
Enzymes [BR:
vtu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IX91_01300
Transcription machinery [BR:
vtu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IX91_01300
DNA repair and recombination proteins [BR:
vtu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IX91_01300
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AIW12869
UniProt:
F9T880
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All DBs
Position
1:262992..263984
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AA seq
330 aa
AA seq
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MQGSVTEFLKPRLVDIEQVSTTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IEGVLHEYSTKEGVQEDILEILLNLKGLAVRVAEGKDEVFITLNKSGSGPVVAGDITHDG
DVEIANPEHVICHLTDDNAEIAMRIKVERGRGYVPASARIHTEEDERPIGRLLVDATYSP
VDKIAYSVEAARVEQRTDLDKLVIDMETNGTLDPEEAIRRAATILAEQLDAFVDLRDVRV
PEEKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKS
LTEIKDVLASRGLSLGMRLENWPPASIAED
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtaacagaatttcttaagccacgtcttgttgacatcgaacaggttagc
acgactcacgcaaaagtaactcttgagccattagagcgtggttttggccatactcttggt
aatgcacttcgccgtattcttctatcttctatgccaggttgtgctgtaacagaagtagaa
atcgaaggcgtacttcatgagtacagcactaaagaaggcgttcaagaagatattcttgaa
atcctacttaaccttaagggtttagctgtacgtgttgccgaaggcaaagatgaagtgttc
attactttgaacaaatcaggctcgggccctgtggttgcaggtgacatcacccatgatggt
gatgtagagatcgctaaccctgaacacgttatttgtcacctaacagatgacaacgctgag
atcgcaatgcgcatcaaagttgaacgtggtcgtggttatgttccggcttcggctcgtatc
catactgaagaagatgagcgtccaattggtcgcctactggttgacgctacgtacagccca
gtagacaagattgcttactctgttgaagcggctcgtgtagagcagcgcacagacttagac
aagcttgttatcgatatggaaacgaacggtactctagaccctgaggaagcaatccgtcgt
gcagctactatcctagctgagcaattggatgcgttcgtagatctacgtgatgtacgtgta
cctgaggagaaggaagagaagccagaattcgatccgatcctactgcgtcctgtagacgat
cttgaactaacagttcgctctgctaactgtctgaaagcagaagcgattcactacatcggt
gatcttgtacagcgtactgaggttgagctacttaaaacgcctaacctgggtaaaaaatct
cttacagagatcaaagacgtacttgcatcacgtggtctttctcttggcatgcgcctagaa
aactggccaccagcgtctatcgctgaagattaa
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