Vigna unguiculata (cowpea): 114193161
Help
Entry
114193161 CDS
T06017
Name
(RefSeq) F-box protein SKP2A-like isoform X1
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114193161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vun04121
]
114193161
Ubiquitin system [BR:
vun04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
114193161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
114193161
NCBI-ProteinID:
XP_027938671
LinkDB
All DBs
Position
8:complement(11049402..11053745)
Genome browser
AA seq
497 aa
AA seq
DB search
MITFFTVLLASGGVHTLVTSSYTWHHTRRYREPYRFFSLSVTRFFFISSTFFTSIAAFRE
AKQTLCSCNQQHPKEPSFLLQRATSRKGYSKVLEFVVRYPCFLCDITCTLFVCKSKGKVY
LALVEMVGKEGLRTGVLNSSFGKLMMVGGGENSGKGVNLKAGVITDWKDIPVELLMQILS
LVDDQTVIIASEVCRGWREAICFGLTRLSLSWCSKNMNNLVLSLAPKFTKLQTLILRQDK
PQLEDNAVETIANFCHDLQILDLSKSFKLTDRSLYAIALGCWHLTKLNISGCSAFSDSAL
AYLASLCRELKVLNLCGCVKAASDTALQAIGHYCNKLQSLNLGWCENVSDVGVTSLAYGC
PDLRTLDLCGCVLITDESVIALANSCPHLRSLGLYYCQNITDRAMYSLAQSKVKNRMWGS
VKGGNDDEDGLRTLNISQCTALTPSAVQAVCDSSPALHTCSGRHSLIMSGCLSLTSVHCA
CAVQAHRAITTIPNTAH
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgatcactttttttactgttcttctagcttctggtggggtccacacccttgtcacttca
agctacacgtggcatcatacgcgtcgctatcgtgagccgtaccgtttcttctctctctct
gtcacccgtttcttctttatttcttctactttcttcacttcaatagcagctttcagagaa
gcgaagcagaccctttgttcctgtaatcagcaacatcctaaagaaccaagctttcttcta
caaagagctacgagtcgcaagggctactccaaggttctagaatttgtcgtgcgttatcct
tgtttcttgtgtgacatcacttgtactttgtttgtttgtaaaagcaagggcaaagtttat
ctggctttggtggaaatggttggcaaggagggtttgagaactggggtgttgaactcaagt
tttgggaagcttatgatggttggtggtggtgaaaatagtgggaaaggagtgaacttgaaa
gctggggtgatcacagattggaaggacattccagtggagcttttgatgcaaattttgtca
cttgttgatgatcaaacggtgatcatagcttctgaagtttgtcgtgggtggagagaggca
atttgctttggccttacccggttgtcactctcatggtgtagcaagaacatgaataacttg
gtcctatctcttgctcctaaatttacaaagttgcaaactttaatccttcgtcaagacaaa
cctcaactagaggacaatgctgtcgagactattgcaaatttctgtcatgacctgcaaatc
ctggacctcagcaaaagtttcaagctcacagatcgttcattgtatgccatagccctaggt
tgttggcatcttacaaaactgaacattagtggttgttcagcctttagtgacagtgctctg
gcttacctagccagtttatgcagagagctgaaagttttgaatctatgtggatgtgttaaa
gctgcatctgacactgcattacaggcaattggacattactgcaataagttacagtctttg
aaccttggatggtgtgaaaatgttagtgatgttggagtaacgagtttggcgtatggctgc
cctgatcttcgaacacttgacttgtgtggttgtgtccttataacagatgagagtgtaatt
gcgttggcaaacagttgtcctcatcttcggtccctgggactgtactactgccaaaacata
acagacagagcaatgtattcattggcacaaagcaaagtgaagaacagaatgtggggttct
gtgaaaggtggaaatgatgatgaggatggactaaggactttgaacatcagccaatgcaca
gcactcactccttctgctgtgcaggctgtgtgtgattcatctcctgcactccacacctgt
tctggaagacactcactcatcatgagtggttgtctcagtctcacatctgtgcactgtgct
tgtgctgtccaagcacaccgtgctatcaccaccattcccaatacagcacattga
DBGET
integrated database retrieval system
