Vitis vinifera (wine grape): 100253716
Help
Entry
100253716 CDS
T01084
Name
(RefSeq) ubiquitin-ribosomal protein eL40z fusion protein
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03010
Ribosome
vvi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
100253716
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100253716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
vvi03011
]
100253716
04121 Ubiquitin system [BR:
vvi04121
]
100253716
Ribosome [BR:
vvi03011
]
Ribosomal proteins
Eukaryotes
Large subunit
100253716
Archaea
100253716
Ubiquitin system [BR:
vvi04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
100253716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
zf-C4pol
TBK1_ULD
Ubiquitin_5
Plexin_RBD
Dsc3_N
DUF2604
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
100253716
NCBI-ProteinID:
XP_002273568
UniProt:
E0CVA2
LinkDB
All DBs
Position
16:complement(join(26990304..26990330,26990420..26990486,26991697..26991799,26992080..26992166,26992995..26993097))
Genome browser
AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGIIEPSLMQLARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ
LRPKKKIK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaaaaccctaactgggaagaccatcaccctcgaggttgaatccagc
gataccatcgacaatgtcaaggccaagatccaggacaaggaagggattcctccggaccag
cagcgactgatctttgctggaaagcagcttgaggatggccgcactcttgctgattacaat
atccagaaagaatcaactctgcatctggttctgaggcttcgtggtggtattattgagcca
tccttgatgcaattggctaggaaatacaatcaggacaaaatgatctgccgcaaatgttat
gcacgcctgcacccacgtgctgtcaactgcaggaaaaagaagtgtggccacagcaaccag
ttgaggccaaagaagaagatcaagtag
DBGET
integrated database retrieval system
