Vitis vinifera (wine grape): 100262179
Help
Entry
100262179 CDS
T01084
Name
(RefSeq) RuvB-like protein 1
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100262179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vvi03036
]
100262179
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
vvi03037
]
100262179
Enzymes [BR:
vvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
100262179
Chromosome and associated proteins [BR:
vvi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
100262179
Chromatin remodeling factors
SRCAP complex
100262179
INO80 complex
100262179
INO80 complex (yeast)
100262179
SWR1 complex
100262179
ASTRA complex
100262179
Cilium and associated proteins [BR:
vvi03037
]
Motile cilia and associated proteins
Dynein assembly factors
100262179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
RuvB_N
AAA_22
AAA_5
AAA_18
AAA_16
Mg_chelatase
bpMoxR
AAA_25
AAA_28
AAA_7
AAA_11
DnaB_C
IstB_IS21
TsaE
Motif
Other DBs
NCBI-GeneID:
100262179
NCBI-ProteinID:
XP_002285127
LinkDB
All DBs
Position
6:complement(join(3688884..3688973,3689112..3689181,3689272..3689363,3689476..3689575,3690201..3690307,3690395..3690460,3691217..3691351,3692344..3692499,3692744..3692893,3693005..3693136,3693313..3693501,3694260..3694340))
Genome browser
AA seq
455 aa
AA seq
DB search
MKIEEVQSTTKKQRVATHTHIKGLGLEANGNAIPLAAGFVGQIGAREASGLVVDMIRQKK
MAGRALLFAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEILMENFRRAI
GLRIKENKEVYEGEVTELSPEETESTTGGYGKSISHVIIGLKTVKGTKQLKLDPTIYDAL
IKEKVAVGDVIYVEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKKKEIVQDVTL
HDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRYIDEGVAELVPGVLF
IDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNVRGTDMSSPHGIPVDLLDRLVIV
RTETYGPADMIQILAIRAQVEELIIDEESLAYLGEIGQEASLRHAVQLLSPASIMARMNG
RDNICKADLEEVKALYLDAKSSARLLQEQQERYIS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagaggaggttcaatccaccactaagaagcagagggtcgccactcacacccat
atcaaaggtctcggtctcgaggccaatggaaatgcaatacctttggctgctggctttgtg
ggacagattggggcaagagaggcttctggtcttgtagttgatatgatacggcagaagaag
atggctggccgggctcttctatttgctggacctcctggtactgggaagacagcactggcc
cttggcatatcccaagagctcggtagcaaggttcctttctgcccaatggtgggatcagag
gtatactcatcagaggtaaagaaaactgagattttaatggaaaatttccgacgggctatt
ggtctacgtatcaaggaaaataaggaagtgtatgaaggagaggtgacagaactctcccca
gaagaaactgagagcacaacaggtggttatggaaaaagcattagccatgtgattattgga
ttaaaaactgtgaagggaaccaagcagctgaaattggacccaactatttatgatgctttg
attaaggagaaggtagctgttggtgatgttatatatgttgaagccaatagtggagctgtt
aaaagggtgggcagaagtgatgcttttgctacagaatttgaccttgaggcggaagagtat
gttccacttcctaaaggagaggttcacaaaaagaaggagatagttcaggatgtaacactt
catgacctggatgctgcaaatgcacggcctcaaggtggacaagatatattgtccctaatg
ggtcagatgatgaagcccaggaaaacagaaatcactgataagttacgacaggaaattaac
aaggttgttaaccgttacatcgatgaaggtgtggcagagcttgttcctggggtcctattt
attgatgaggtacacatgctggatatggagtgtttttcatatttgaatcgtgctctagag
agctcactgtctccaatagtaattttcgctacaaataggggaatatgtaatgtaagagga
actgatatgagtagtcctcatggcatacctgttgacttgttagaccggttggtgattgta
cggacggaaacttatggtcctgctgatatgattcagattttagcaatccgtgcacaggtg
gaggaactgattatagatgaagaaagtctagcttaccttggagaaattggacaagaagct
tcattaaggcatgcagttcagctcttatcacctgctagcattatggccaggatgaatggt
cgagacaacatttgcaaggctgatctggaggaagtgaaggctctatatctagacgcaaag
tcttcagcaaggcttctgcaggagcagcaggaaagatacatctcatga
DBGET
integrated database retrieval system
