Weissella cibaria: AO080_03825
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Entry
AO080_03825 CDS
T04106
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
wcb
Weissella cibaria
Pathway
wcb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
wcb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AO080_03825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wcb03021
]
AO080_03825
03400 DNA repair and recombination proteins [BR:
wcb03400
]
AO080_03825
Enzymes [BR:
wcb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AO080_03825
Transcription machinery [BR:
wcb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AO080_03825
DNA repair and recombination proteins [BR:
wcb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AO080_03825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
ALI32630
UniProt:
A0A0D1LZ88
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All DBs
Position
810265..811209
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AA seq
314 aa
AA seq
DB search
MLEFENPKITLVEEDSNYGKFVVEPLERGYGTTLGNSLRRVLLSSLPGAAINSVQIDGVL
HEFSTVEGVVEDVTQIILNLKKVSMRIDSDEEKTLEVNVTGPATVTAGDIAGDSDVEILN
KDLHIATVAAGATLHMTLSAERGRGYVSADQNKELHDEMPIGVLAIDSIFTPIERVNYQV
ENTRVGNRDDFDKLTLDIWTDGSLTATEAISLAARIMSDHLNSFVELSERAVNTQVMVDK
EEAPTSKHADTPIEELDLSVRSYNCLKRAGINSVQELTERTETQMMSVRNLGRKSLDEIQ
EKLAVLGLGFRKED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaattcgaaaacccaaagattacgctggttgaagaggatagcaattacggtaag
tttgtggttgagccgcttgaacgtggttacggaactactttgggtaactccctacgccgt
gtattgttgtcttcattgcctggtgcggcaatcaattcagtacaaattgatggcgttttg
cacgagttttcaacggtcgaaggtgtcgttgaagacgttacgcaaatcattttgaacctc
aagaaggtttcaatgcgcatcgacagtgatgaagagaagacgctcgaagttaacgtaacc
ggtcccgctactgtgacggccggcgacatcgctggtgacagtgatgtggagattttgaac
aaggaccttcacattgccactgttgcggctggggctacgttgcacatgactttgtctgca
gaacgcggacgtggttatgtgtctgcggaccagaataaggaattgcatgatgaaatgcca
attggcgttctagcaattgattcaatctttaccccaatcgaacgcgtaaactatcaagtt
gagaacacgcgtgtgggtaaccgtgatgactttgacaagttgactttggacatctggact
gatggatcattgactgctactgaagctatttcattggcagctcgcatcatgtcagaccac
ttgaactcattcgttgagttgtcagaacgtgcggttaacacacaagtgatggtagacaag
gaagaagcaccaactagcaagcatgccgacactcctattgaagagttggacttgtcagtt
cgttcttataattgtctcaaaagggccgggatcaactctgtacaagagttgacggagcgt
acagaaactcaaatgatgtctgtacgaaacctcggtcggaaatcacttgacgaaatccag
gaaaagctggcagtgctcggtttagggttccgcaaggaagattag
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