Wolbachia endosymbiont of Wiebesia pumilae: HUB92_04610
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Entry
HUB92_04610 CDS
T07687
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
wew
Wolbachia endosymbiont of Wiebesia pumilae
Brite
KEGG Orthology (KO) [BR:
wew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wew03032
]
HUB92_04610 (topA)
03400 DNA repair and recombination proteins [BR:
wew03400
]
HUB92_04610 (topA)
Enzymes [BR:
wew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HUB92_04610 (topA)
DNA replication proteins [BR:
wew03032
]
Prokaryotic type
DNA Topoisomerases
HUB92_04610 (topA)
DNA repair and recombination proteins [BR:
wew03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HUB92_04610 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
zf-C4_Topoisom
Toprim_4
Toprim_2
SPOB_a
Motif
Other DBs
NCBI-ProteinID:
QTP62144
LinkDB
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Position
880687..883137
Genome browser
AA seq
816 aa
AA seq
DB search
MALLIVESPAKAKTIGKYLSKEFKVAASFGHVRDLPAKNGSVDPDNDFAIKYETIEKAEK
YIKELVKAASKTSDIYLATDPDREGEAMAWHVIETLKEKKAISNENNIYRVVFNEITKRA
VQEAIKNPREINMDLVRAQQARRALDYLVGFSLSPLLWTKLSGSKSAGRVQSVALKIICE
REDEISKFITQEYWSIKAEMQNSKDEAFFAMLSHYDNKKLEKFDIKNEEEAKNLVREIES
RQYAVSTVERKQVKRNPLPPFITSSLQQDAVNKLYFNVKSVMRIAQNLYEGIDIGGETVG
LITYMRTDGFHIADEAINSIRGSIKSLYGDKYLPQSPRKYVKKVKNAQEAHEAIRPTDIN
RTPGSIKDYLTPEQFKLYDLIWKRTIASQMESAILDQVVVEISSTDQKVILRASGSSIFF
DGFYRVYQDNIEAENEGLLPAMKEGEACKLISVEPKQHFTQPPPRYSEASIVKKMEEIGI
GRPSTYATIISVLQDREYVSLDSKRFIPSSRGKIVTIFLETFFQRCVEYDFTAQMEEKLD
LISNGHADWKKELGHFWVPFFGHVNSVKQMTHDEVFSGIHDLVIDWFCSEEGRKEVNTKC
PACLGGILKLNFGKAGVFLGCSNYPECNHTKEITGSNDNSEYPKSLGIDDITNQEVMIKK
GPFGLYLEFNNELKKKKTVSIPKDINVNEIDLSTATQLLSLPKVIGEHPETGKEVKIGLG
RFGYYIFYDGKYFSLKKSSKEVLNTELSEVVQIIANSPRKELKSLGVNEKGKEVFICNGR
YGFYIKCGKTNVALGKSADIESIDLEKALELIKGKK
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggcattattaatagttgaatcacctgcgaaagcaaagacaataggtaaatatttgagt
aaagagttcaaagtagctgcatcctttggacatgtgagggatcttccagcaaaaaacggt
tctgtcgatccggataatgattttgctataaagtatgaaaccattgaaaaagcagaaaag
tatataaaagagctagtaaaagccgcaagcaaaacatcagatatatatcttgcaacagac
ccagacagagaaggggaagcaatggcttggcatgtgatagagacattaaaagaaaagaaa
gcaatcagtaatgaaaacaacatttatagagtagtctttaatgagataacaaaaagagca
gtacaagaagcaataaaaaatccacgtgaaattaatatggatttagtgcgtgcacaacaa
gcacgtagagctttggattatctagttggatttagtttgtcaccactgctgtggacaaaa
ttgtcgggaagcaagtctgcagggcgagtgcagtctgttgcattaaagattatatgcgaa
cgagaagatgaaattagtaaatttataacacaggagtattggagcataaaagcagaaatg
caaaatagcaaagatgaggctttttttgctatgctaagccactatgacaataaaaagcta
gaaaaatttgatattaagaatgaagaagaagcaaagaacttagtcagggagattgaatca
aggcaatatgctgtaagcacagtagaacgcaagcaagttaagagaaacccgcttcctccg
tttattacttcaagtcttcagcaagatgcagtgaataaactgtattttaatgtgaaaagt
gttatgcgcatagcgcaaaatttatatgaaggtatcgatattggtggtgaaactgtaggg
ttgataacttacatgcgtacagatgggtttcatattgcagatgaggctataaactcaatt
agagggtcaattaagtcattatatggtgataaatatttaccgcagtctcctcgtaaatat
gtaaaaaaggtcaaaaatgctcaagaagcacatgaagcaattcgtccaactgatatcaat
agaacgccgggtagtattaaggattacttaacgccagagcaatttaaattgtatgattta
atctggaaaaggaccattgcaagtcaaatggagtcggcgattcttgatcaagtggtagtc
gaaattagttctactgaccagaaagtaattctgcgagcaagtggatcaagtatattcttt
gatggtttttatagagtctaccaagataacatagaagccgaaaatgaaggcctgctacct
gccatgaaggaaggggaagcgtgtaagctgatttcagttgagccaaaacaacatttcact
caaccgccacctcgttatagtgaagcaagtatcgtaaaaaaaatggaagaaatcggtata
ggtcgaccatcaacttatgcaacaattatttcggtattacaagatcgtgagtacgtttca
ttggatagcaaaaggtttattccaagcagccgcggtaaaatcgttactatatttttagaa
actttttttcagcgttgtgtagagtatgatttcacagcacaaatggaagagaagcttgat
ttaatttcaaatggacatgcagattggaaaaaagaattaggccacttttgggtgccattt
tttggtcatgtaaactctgtcaagcaaatgacgcatgatgaagttttcagcggcattcac
gatttggtaatcgattggttttgttcagaagaaggaagaaaagaggtgaatacgaaatgc
cctgcttgcttaggtggcatattgaaattgaactttggaaaagccggggtgttccttgga
tgttctaactatcctgaatgcaaccatacaaaagaaattacaggtagtaacgacaattca
gaatatccaaaaagtttaggtatagatgatataacaaaccaagaagtgatgatcaaaaag
ggtccttttggactttatctggagtttaataacgagttaaaaaagaaaaaaacggtttcc
ataccaaaagatataaatgttaatgagattgatctgagcaccgctactcagttactttcc
ttgccaaaagtaatcggagaacaccctgaaaccggaaaggaagtaaaaataggccttgga
cgatttgggtactatattttctatgatggtaaatacttttctcttaagaaaagctccaaa
gaggtgctgaatacagaattgagcgaagttgtacaaattattgcaaacagtccacgcaaa
gagttaaaatctctcggggttaatgaaaagggaaaagaagtttttatctgcaacggtagg
tacggattctatataaaatgcggtaaaacaaacgttgctttgggcaagagtgcagatatt
gagagtatagatctggagaaggctttagagttgattaagggtaagaagtag
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