Weissella jogaejeotgali: FOL01_1251
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Entry
FOL01_1251 CDS
T04632
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshB
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
wjo
Weissella jogaejeotgali
Brite
KEGG Orthology (KO) [BR:
wjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wjo03019
]
FOL01_1251
03009 Ribosome biogenesis [BR:
wjo03009
]
FOL01_1251
Enzymes [BR:
wjo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FOL01_1251
Messenger RNA biogenesis [BR:
wjo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FOL01_1251
Ribosome biogenesis [BR:
wjo03009
]
Prokaryotic type
rRNA helicases
FOL01_1251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Helicase_RecD
AAA_30
Flavi_DEAD
Mito_fiss_Elm1
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
APS42110
UniProt:
A0A1L6RCA3
LinkDB
All DBs
Position
complement(1321195..1322553)
Genome browser
AA seq
452 aa
AA seq
DB search
MAKFTDYNLRSEIYEALTALHFKEPTAVQAKLIPVILQGHSVVGQSQTGSGKTHTFLIPI
FQQYDAENQNVQAVITTPSRELAQQIYEAAKQLGSTFSESDQPRISLYVGGMDKSRQIHQ
LKNKQPQIVIGTPGRIKDLYQAGELDIHTASTLVVDEADMTLDLGFLPDVDAIASAMPED
LKMHVFSATIPQKLQPFLKKYLSNPVIEEIPSETVIAPTIKNILVGTKGESKDTLVYNLL
TMGNPYLALVFANTKKRAHELTKSLRSRGLKVAEIHGGIQPRERKRTMQQIQHLDYQYVV
ATDLAARGIDIPGVSLIINDGIPTELEFFIHRVGRTGRNGMSGTAITIYNPDEENRVQMV
ENMGVKFEPMTYAHGELKSGYDRRRRQKRAKTTAKLDPTMIGMVKKKKKRVKPGYKRQIK
NNIARDAKYKKRVEERETLRAAKKAKKRSHGK
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatttaccgattataatttacggtcagagatttatgaagctctgacggcatta
cattttaaagaaccaacagctgtgcaagcaaaacttattccagtgattttacagggacat
tcagtagttggacagtcacagacgggatcagggaagacccatacttttttaattccaatt
tttcaacaatatgatgctgaaaatcaaaacgtacaggcagttattacaacaccttcacga
gaattagcacaacaaatctatgaggcagcaaagcaattaggtagtactttttcagaatct
gatcaaccacggattagcttgtatgttggtggaatggataaaagtcgtcaaattcatcaa
ctaaaaaataagcagccacaaattgttattggaacgcctggtcgtattaaagacttatac
caagctggtgaactagatattcatacggctagcacactagtcgtagatgaagcagatatg
acacttgatctaggttttctacctgacgtagatgcgattgcgagcgcaatgcctgaagat
ttgaaaatgcacgtcttttcagcaacgattccacagaaattacaaccatttttgaaaaaa
tatttgtcaaatcctgtcattgaagaaattccttcagagacagtgattgcgccaaccatt
aaaaatattttggtgggtacaaagggtgaatctaaagatactttagtttataacttatta
acgatgggaaacccatatttggcattagtttttgcaaataccaaaaaaagggcacatgag
ttaacaaaaagtttacgtagtcgtggcttaaaagttgctgaaatccatggtggtattcaa
ccacgtgagcgtaagcgaacgatgcaacaaattcaacatttagattatcaatatgtcgtt
gctactgatttggcggccagaggaattgatattccaggtgtctcactaattatcaatgat
ggtattccaacagagctagagttctttattcaccgagttggtcgaacaggccgaaacggg
atgtctggaacagctattacaatctataatccagatgaagaaaatcgtgtccaaatggtt
gaaaatatgggcgtgaaatttgagccaatgacctatgcacatggtgagttgaaatcaggt
tatgatcgtcgtcgtcgtcagaaacgtgcaaagacaactgctaaattagatccaaccatg
attggtatggtgaaaaagaagaagaagcgcgttaagccgggttataaacgacaaattaaa
aataatattgctcgtgatgcaaaatataagaaacgcgttgaagagcgtgagacgttacgt
gctgctaaaaaagcgaaaaaaaggtcgcacggtaaataa
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