Woeseia oceani: BA177_10450
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Entry
BA177_10450 CDS
T04427
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
woc
Woeseia oceani
Pathway
woc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
woc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BA177_10450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
woc03019
]
BA177_10450
03400 DNA repair and recombination proteins [BR:
woc03400
]
BA177_10450
Enzymes [BR:
woc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BA177_10450
Messenger RNA biogenesis [BR:
woc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BA177_10450
DNA repair and recombination proteins [BR:
woc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BA177_10450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
ANO51568
UniProt:
A0A193LGI2
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All DBs
Position
complement(2322321..2324129)
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AA seq
602 aa
AA seq
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MSSTAQETLRRVFGYDAFRGAQEAVIESVIAGRDALVIMPTGGGKSLCYQIPALLRAGAG
LVVSPLIALMQDQVAALHEAGVEAGFLNSSQTDEEQRDVVRQLRDGKLQLLYVAPERLAN
GSTRALLREVPLSVIAIDEAHCVSQWGHDFRQEYLQLGELKTLFPGVPRMALTATATRLT
RNEIVERLALDDPGIFVSPFDRPNISYLVQPKTDAKRQLLKFLQGHRKEAGIVYCLSRKK
TESTADWLFAQGYNALPYHAGLASHVRSEHQRRFLNEDAVIIVATIAFGMGIDKPDVRFV
AHLDLPKSMESYYQETGRAGRDGEPADAWMVYGLQDVVRLRQMLDDSDANEEFKRHERQK
LDALLGWCEVTGCRRRPLLEYFGDQPENDCGNCDGCLTPVRTWEGTEAAQKLLSAVYRTG
QRFGAAHVIDVLAGKTTDKVRQHGHTELSVFGIGSEFDATVWRSVIRQLIVRGYLRSDAE
RFGALVLTEQSRGLLRGEVTVQFREDPKRPATVRTSASSGPAIAPQHAGMWDALRSCRQK
LASEHDVPPYVIFHDKTLQQMLIDRPQNEADLLEISGVGQTKLDRYGAHFLEVLRDPAHA
RS
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtacagcacaggaaacgttgcgtcgggtcttcggctatgacgcctttcgtggc
gcgcaggaagcggtaattgagtcagttatcgcaggccgggacgcgttggtcattatgccc
accggcggcggtaaatcgctttgttaccagattcctgccttgctgcgtgcaggggctggc
ctcgttgtttcgccattgattgcgttgatgcaggatcaggtcgccgcgctgcacgaagcc
ggcgtcgaggcgggttttttaaactccagccagaccgatgaagaacaacgtgacgttgtc
cggcagttgcgcgacggcaaactgcagttactttacgttgccccggagcggctggccaac
ggcagcacccgggccttgctgcgtgaagtaccgttatcggtgatcgcgattgacgaagcc
cattgcgtgtcgcaatggggacatgatttccggcaggagtacctgcaactcggtgaactg
aagacgctgtttccgggtgtgccacgcatggcactgacagccacagcaacacgactcacc
cgcaatgagattgtggaacgactggcgctcgacgatccgggtatattcgtcagtcccttt
gaccggcccaacatttcttacctcgtacaaccgaaaaccgatgcaaaacggcagctcctg
aagtttttgcagggccaccgcaaggaagccggcatcgtctattgcctgtcccgcaagaaa
accgaaagcactgcagactggttgtttgcgcaaggttacaacgcgttgccttatcacgca
gggctggccagtcacgtgcgtagtgagcatcaacgccggtttttgaacgaggacgcggtc
atcattgtggcgacaatcgcgttcggcatgggtatcgacaaaccggacgtgcgtttcgtg
gcccatctggatctgccgaaaagcatggaatcgtactatcaggaaaccggccgcgctgga
cgtgatggcgaacccgcagatgcgtggatggtgtacggcttgcaggacgtggtgcgcttg
cggcagatgctggatgattcggacgctaacgaagagttcaaacgtcacgaacggcagaaa
ctcgacgcattgttgggctggtgtgaagttaccggctgccgacgtaggcctttactggag
tattttggcgaccagcccgaaaacgattgcgggaactgcgatggctgtctgacacctgtg
cgtacctgggaaggtactgaggcagcccagaaattgttgtcggctgtgtatcggaccggc
cagcgctttggtgcggcgcacgttatagacgtgttggcgggcaagacgacggacaaggtt
cgccagcacgggcatacggagctaagtgtgttcggtataggcagcgaatttgatgcgacg
gtttggcggtcggtcatacgccagctcatcgtacgaggctatttgcgctccgatgccgaa
cgcttcggcgcgctggtactgacggaacaaagtcggggcttgctgcgtggcgaagtcacg
gtacagtttcgtgaggacccgaaacgacccgccactgtgcgcacctcggcaagctcggga
ccagcgatcgcgccgcagcacgccggcatgtgggatgcgctgcgcagttgccggcagaag
ctggcgagcgaacacgatgtaccgccttacgtcatatttcatgacaagacgctgcaacag
atgctgattgaccggccacagaacgaggccgatttactcgagatcagcggcgtagggcag
accaagctggatcgctacggcgcgcattttctcgaagtgttgcgcgatccggcgcacgcc
cggagttga
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