Wolbachia pipientis: DEJ70_03140
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Entry
DEJ70_03140 CDS
T05842
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
wpp
Wolbachia pipientis
Pathway
wpp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wpp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DEJ70_03140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wpp03019
]
DEJ70_03140
03009 Ribosome biogenesis [BR:
wpp03009
]
DEJ70_03140
Enzymes [BR:
wpp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
DEJ70_03140
Messenger RNA biogenesis [BR:
wpp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DEJ70_03140
Ribosome biogenesis [BR:
wpp03009
]
Prokaryotic type
rRNA processing factors
DEJ70_03140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
QBB83802
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Position
653485..655233
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AA seq
582 aa
AA seq
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MVSDGKRLLLIESTTCSNEVRVALLVNGRVVEFEQEFKEKKQLRGNIYVAYVKRIEPALQ
AVFIEYGKNKQGFLSFSEISLNYFNIPEKEKEIFPDEDYSSGVDCSNDNCTEEGLDSTAS
NESSSGFVRGVPLHRKYKLQDVISVNQKLLVQLTKEERGNKGASFTTYVTLVGRYCVFMP
NSISRGGVSRRIEDTNVRKQLKDILNSINLPKGSGLIVRTVGAGKSKKEIEQDYNNLTLL
WQNIQQNFSSLNVPSLIYNEADVVMRSVRDFCSNDTEIIVSDREVCEAVRKYTKNVLQGK
LRPRLYRGFVPIFTYYRVGDQISELYSNRVELPSGGSLVITLTEAFVSIDVNSGKMTGED
NIEETAYRTNMEALSEISRQANLRGLSGLIVVDFIDMSKLEYCKNVEFAIKQAFKDDKAK
VQFSFINDFGLMVFSRQRIKPNIQEINTTECLRCKGIGRVKSNEVVVASILRDLQHIANK
NQNKSFDLIARSAVIAHIFNNKRDMVSTIEKEFNITLNVSIDNSLDADTFILKQGDHINF
NDYKPLQNSGCQIVNSRDKEAGKLPGNFWLTKWLSRLLGSNN
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
gtggtgagtgatggcaaaaggttattgttgatagaaagtactacctgttctaacgaggta
agggttgccctactagttaatggtagggttgtagagtttgaacaagaattcaaggaaaaa
aaacaattaagaggtaatatatacgttgcttatgtaaagcgtatagagcctgctttgcag
gccgtgttcattgagtatggaaaaaataagcaaggttttttgtctttttctgagatatct
ctaaattattttaatattccagaaaaagagaaggaaattttccctgatgaagactattcg
agcggtgtggactgttcaaatgataattgcacagaagaaggcctagattctacagctagt
aatgaatccagcagtggttttgtgaggggggtacctttacatagaaaatataagttacaa
gatgtgatttcagtaaatcaaaagttattagttcaattaactaaagaagaacgaggaaat
aaaggagcttcatttacaacatacgtaactttggtcggtagatactgtgttttcatgccc
aattccataagtaggggtggagtatctcgcagaattgaagataccaacgttagaaaacag
ttaaaggatatattaaattcaataaatttaccaaaaggctcaggtttgatagtaagaact
gttggtgcaggaaaaagtaagaaagaaattgagcaagattacaataatttgaccttatta
tggcaaaatatccagcaaaacttctcttctttaaatgttccatcattaatttacaacgaa
gcagatgtagttatgagatctgtacgtgacttttgtagtaatgatacagaaattatagta
tctgatagagaagtttgtgaagcggtaagaaaatacactaaaaatgtgttacaaggaaaa
ttacgtcctaggttatatagaggctttgttccaatctttacttactatcgagtcggagat
caaatttctgaattatatagcaatagagtagaattgccatctggtgggtctttggtgata
accttaactgaggcatttgtttcaatagacgtaaattcagggaaaatgacaggagaagat
aacatagaagaaacagcttatagaactaatatggaggcattatctgaaatatcaaggcaa
gcgaatctcaggggcttatcagggttaatagttgttgattttattgatatgtcgaaactt
gagtattgcaaaaatgttgaatttgctatcaagcaggcgtttaaagatgataaagctaaa
gttcaatttagctttatcaatgactttggtttaatggtcttttcaagacaaagaattaaa
ccaaatatacaggaaattaatactacagagtgcttacgctgtaaaggtattggaagagtg
aaatcaaacgaagtggttgttgcatcgatactaagggatttgcaacatattgctaataaa
aatcaaaataagtcctttgatttaatagcacgcagtgcagttatagcgcacatttttaat
aataagcgtgatatggtttctacaatcgaaaaagagttcaatattacattaaatgttagt
attgataatagtttagatgcagatacatttattttaaagcaaggagaccatattaatttt
aatgattataagccattgcagaattctggatgtcaaattgtgaatagcagggataaagaa
gctggtaaactaccgggcaacttttggttaactaaatggctttcgcgccttttgggctct
aacaactaa
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