KEGG   Wallemia mellicola: WALSEDRAFT_68167
Entry
WALSEDRAFT_68167  CDS       T03142                                 
Name
(RefSeq) transcription factor Tfb4
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
wse  Wallemia mellicola
Pathway
wse03022  Basal transcription factors
wse03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:wse00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    WALSEDRAFT_68167
  09124 Replication and repair
   03420 Nucleotide excision repair
    WALSEDRAFT_68167
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:wse03021]
    WALSEDRAFT_68167
   03400 DNA repair and recombination proteins [BR:wse03400]
    WALSEDRAFT_68167
Transcription machinery [BR:wse03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     WALSEDRAFT_68167
DNA repair and recombination proteins [BR:wse03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     WALSEDRAFT_68167
SSDB
Motif
Pfam: Tfb4
Other DBs
NCBI-GeneID: 18475357
NCBI-ProteinID: XP_006957397
JGI: Walse1_68167
UniProt: I4YFJ6
LinkDB
Position
Unknown
AA seq 272 aa
MSANHLSLVADIKNKNLNLNVIKQLLVFINAHLSNSDLNSASIHINTSILLDTQEDDIGF
GDISERFIRYVNNYYVGCRNDVSTASSTLASTLAQSLCHVNRKIVQESKSTFRILVVAAS
DDVPPEYVSLMNSIFAAQKSKIVIDVVQIYNCNTIFLQQAAHLTGGNFIQATDPESLVQY
LIMAFLPSQPLRARLVQPRSDKVDFRAACFCHKRIVDIAYICSVCLSIFCQPPQRCSTCN
SVFPAKTLQKFTGSLQTHSHAPFQPSSLRESL
NT seq 819 nt   +upstreamnt  +downstreamnt
atgtcagctaaccatctgagtttggtggcagatataaaaaataaaaatctaaatttgaac
gttataaagcagcttttagtttttatcaatgcccatttgtctaattctgacctaaatagc
gcgtctatacacatcaacactagcattttgttagatacccaggaggatgatatcggcttt
ggggatatcagcgagcgctttatacgatacgtcaataactattacgttggatgcaggaat
gatgttagtactgcctcgagtacgcttgccagcacactcgctcagtctctctgccacgta
aataggaaaatcgtacaagagtcaaagtcgactttccggattctcgtcgttgcggcatca
gacgacgtacctccagagtacgtcagcttgatgaacagcatcttcgcagcccagaaaagc
aaaattgtcatagacgtagtacaaatatacaactgcaacactattttcctacagcaggcc
gcgcacctgactggaggcaacttcatacaagccacagacccagaaagcctggtgcagtac
ctcattatggctttccttccgtctcagccgctcagagctcgcttagtccagcctcgctcc
gataaggttgacttccgggccgcctgcttctgccacaaacgcatagtagacattgcttac
atatgctccgtctgtcttagtatcttctgccagccaccacagcgatgttcaacttgcaat
agcgtctttccagccaagacgctgcagaaattcactggaagcttacagacacactcacat
gctccattccaaccatccagtttgagggaatcactgtaa

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