KEGG   Xanthomonas sp. SS: HEP74_00035
Entry
HEP74_00035       CDS       T09534                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
xas  Xanthomonas sp. SS
Pathway
xas03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:xas00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    HEP74_00035
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xas03400]
    HEP74_00035
DNA repair and recombination proteins [BR:xas03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     HEP74_00035
SSDB
Motif
Pfam: Ku Pol_alpha_B_N
Other DBs
NCBI-ProteinID: QNH14922
UniProt: A0A7G7SDV2
LinkDB
Position
35030..36004
AA seq 324 aa
MARPIWTGTLSFGLLNVPVALMSGERRVDLHFRMLDARDKRPIRFERVNADTGEEVPWKD
IVKAFEYSKGNYVVVEQKDIASAAPESHETVEVEAFVDAADIDLRYFEKPYVLVPGKKAE
KGYVLLRETLRATGKVGIARVVIRTREYLSAVLPQEDALVLILLRYPQELVALDDYTLPS
GKAADYRISAKETEMAAQLIDSMSGKWDPASYHDEFRERLQAVIQKRIKAQEGTAQVDDE
ADTPQREDAATNVVDFMSLLQKSLDAKRRTPAKKAEALPVSKTAKKPTRKAAKKAAKPAA
KSASKAKPAKKTAASKAPARRKAG
NT seq 975 nt   +upstreamnt  +downstreamnt
atggcgcgtccgatctggaccggcaccctgtccttcggcctgctcaatgtgccggtggcg
ctgatgtccggcgaacgccgcgtcgacctgcacttccgcatgctcgatgcgcgcgacaag
cggccgatccgcttcgagcgggtcaatgccgacaccggcgaagaggtgccgtggaaggac
atcgtcaaggccttcgaatacagcaagggcaactacgtggtggtcgagcagaaggacatc
gcctcggccgcgccggaaagccacgagacggtggaggtcgaggccttcgtcgacgccgcc
gacatcgacctgcgctacttcgaaaagccctacgtgctggtgccgggcaagaaggcggag
aagggctacgtgctgctgcgcgagacgctgcgcgccaccggcaaggtcggcatcgcgcgg
gtggtgatccgcacccgcgaatacctgtcggcagtgctgccgcaggaagacgcgctggtg
ctgatcctgctgcgctatccgcaggaactggtcgcgctggacgactacacgctgcccagc
ggcaaggccgccgactaccggatcagcgccaaggaaaccgagatggccgcacagctgatc
gactcgatgtccggcaagtgggacccggcgtcctatcacgacgaattccgcgagcgcctg
caggcggtgatccagaagcggatcaaggcgcaggaaggcaccgcgcaggtggacgacgag
gccgacacgccgcagcgcgaggatgccgccaccaacgtggtcgatttcatgtcgctgctg
cagaagagcctggacgccaagcgccgcactccggcgaagaaggcggaggcgctgccggtc
agcaagaccgcgaagaagccgaccaggaaagcggcgaagaaggccgccaagcccgccgcg
aaatccgcgagcaaggccaagccggcgaagaagaccgccgcaagcaaggcgccggcgcgg
cgcaaggcggggtag

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