Xanthomonas axonopodis pv. citrumelo F1: XACM_3478
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Entry
XACM_3478 CDS
T01616
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
xax
Xanthomonas axonopodis pv. citrumelo F1
Pathway
xax00521
Streptomycin biosynthesis
xax00523
Polyketide sugar unit biosynthesis
xax00541
O-Antigen nucleotide sugar biosynthesis
xax01100
Metabolic pathways
xax01110
Biosynthesis of secondary metabolites
xax01250
Biosynthesis of nucleotide sugars
Module
xax_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
xax00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
XACM_3478 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
XACM_3478 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
XACM_3478 (rmlC)
Enzymes [BR:
xax01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
XACM_3478 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AEO43724
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Position
complement(4060747..4061304)
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AA seq
185 aa
AA seq
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MKVIQTRLPGCMLIEPAVYDDGRGYFFESWNAERFAEKGLPANFVQSNVSSSSKGVLRGL
HYQWPRPQGKLVSVLEGEVYDVAVDIRHGSPHFGQWVAALLSAENKRQFWIPEGFAHGFA
VLSEKALFSYLCTDVYVKEADAGVRWDDAAIGIDWPISNPLLSAKDSAAPFLGDVPAERL
PVYTP
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagtgattcagacacggttgccgggttgcatgctgatcgaaccagcggtatatgac
gatgggcgtgggtacttctttgaaagttggaacgccgagcgtttcgccgaaaaagggctc
ccagcaaattttgtgcaaagcaatgtttcaagctcatcgaagggcgttctccgtggcctt
cactatcagtggccgcgcccgcaaggcaagctggttagcgtcctggaaggtgaggtatac
gatgttgccgtcgatatcaggcacggctctccgcacttcggtcaatgggtggccgcactg
ttgagcgcggagaataagcggcaattttggattccggagggttttgcgcatggtttcgca
gtgctctctgagaaagcattattcagctacctatgcaccgacgtctacgtgaaggaggcc
gatgccggcgtgcgctgggatgatgcggcaattggcatcgactggccgatcagcaacccg
ttgttgtctgcaaaggactccgccgcgccgtttctgggcgatgtgccggccgaacgcctg
ccggtgtatacgccgtga
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