Xenorhabdus bovienii SS-2004: XBJ1_1058
Help
Entry
XBJ1_1058 CDS
T01186
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase, Fe-S protein
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
xbo
Xenorhabdus bovienii SS-2004
Pathway
xbo00020
Citrate cycle (TCA cycle)
xbo00190
Oxidative phosphorylation
xbo00650
Butanoate metabolism
xbo01100
Metabolic pathways
xbo01110
Biosynthesis of secondary metabolites
xbo01120
Microbial metabolism in diverse environments
xbo01200
Carbon metabolism
Module
xbo_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xbo_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
xbo_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
XBJ1_1058 (sdhB)
00650 Butanoate metabolism
XBJ1_1058 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
XBJ1_1058 (sdhB)
Enzymes [BR:
xbo01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
XBJ1_1058 (sdhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_17
Fer4_8
Fer4_10
Fer4_18
Fer4_7
Fer4_9
Fer4
Motif
Other DBs
NCBI-ProteinID:
CBJ80199
UniProt:
D3UX87
LinkDB
All DBs
Position
complement(1051922..1052638)
Genome browser
AA seq
238 aa
AA seq
DB search
MKLEFSIYRYNPDVDNAPRMQDYTLEAEEGRDMMLLDALIQLKEQDPTLSFRRSCREGVC
GSDGVNMNGKNGLACVTPVSVLRRGNKKIVIRPLPGLPVVRDLVVDMSQFYTQYEKIRPY
LINDGKNPPAREHLQSPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYR
FLIDSRDTETASRLDGLNDAFSVFRCHSIMNCVSVCPKGLNPTKAIGHIKSMLLKHSA
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttgaattttcgatttatcgttataatccggatgtagataacgcaccccgtatg
caggattacacgctggaagccgaggaagggcgtgacatgatgctgctggatgcgcttatc
cagttaaaagagcaggacccgaccttatcattccgccgttcttgccgtgaaggtgtttgt
ggctctgacggtgtgaacatgaatggtaagaatggtctggcttgtgttactcccgtttcg
gtactgcgccggggtaataagaagattgtcattcggccgttgcctggtttgcctgttgtt
cgtgatctggttgttgatatgagccagttctacacgcaatatgagaaaatccgtccttat
ttgattaacgatggtaaaaacccaccagcgcgcgaacatctacaatcaccggaacagcgt
gaaaaactggatggcctctatgaatgtatcctgtgtgcctgttgctcgacgtcttgtcca
tcgttctggtggaacccagataagtttattgggccggcaggtcttttggctgcgtaccgt
ttcctgattgacagtcgtgatactgaaacggcttcacgattggatggactgaatgatgcg
ttcagcgttttccgctgtcatagcatcatgaactgtgtcagcgtctgtcctaaagggttg
aacccgacaaaagcgattggtcatattaagtcgatgctgctgaaacacagcgcataa
DBGET
integrated database retrieval system
