Xanthomonas campestris pv. campestris 8004: XC_0957
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Entry
XC_0957 CDS
T00247
Name
(GenBank) RNA polymerase omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
xcb
Xanthomonas campestris pv. campestris 8004
Pathway
xcb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
xcb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
XC_0957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xcb03021
]
XC_0957
03400 DNA repair and recombination proteins [BR:
xcb03400
]
XC_0957
Enzymes [BR:
xcb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
XC_0957
Transcription machinery [BR:
xcb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
XC_0957
DNA repair and recombination proteins [BR:
xcb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
XC_0957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
AAY48031
UniProt:
Q4UY42
LinkDB
All DBs
Position
complement(1151288..1151587)
Genome browser
AA seq
99 aa
AA seq
DB search
MARITVEDCLEVVNNRFELVMMASKRARQLANGVQPLIENADASDKPTVMALREIAARRI
DNALIDEVEKAERERAEREALEWAAAEVVADEDMSKNDD
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcattaccgtagaagattgcctggaagtcgtgaacaaccgttttgagctggtc
atgatggcctccaagcgtgcgcgtcagctcgccaacggcgtgcagccgctgatcgagaac
gccgacgccagcgacaagcccaccgtgatggcgctgcgcgaaatcgccgcacgccggatc
gacaacgcactgatcgatgaagtcgaaaaggccgagcgcgagcgcgccgagcgcgaagcc
ctggaatgggctgccgccgaagtggtcgccgacgaagacatgtccaagaacgacgactga
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