Xanthomonas campestris pv. campestris 8004: XC_1295
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Entry
XC_1295 CDS
T00247
Name
(GenBank) transcriptional regulator ahyR/asaR family
KO
K07782
LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
Organism
xcb
Xanthomonas campestris pv. campestris 8004
Pathway
xcb02020
Two-component system
xcb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xcb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
XC_1295
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
XC_1295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xcb03000
]
XC_1295
Transcription factors [BR:
xcb03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
XC_1295
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
HTH_38
Sigma70_r4
HTH_23
HTH_40
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AAY48364
UniProt:
A0A0H2X582
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Position
1583309..1584073
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AA seq
254 aa
AA seq
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MFDTLASLGRDLQARETLNACLDRVFRDVCALGFQSLVYDYAPVPLSMEGALITPSVFLQ
RNAPDDMHNVWCEHGYYQNDPVQQRATRRTTPFVWSYRTEGRTEGVEYVGDQHRQVTRYL
CDSDMGTGVTVPLHLPGGAFATFSAAVNVTQAEAPRLAEAQLPPFLLLAHAFQARAQELL
DPQERRCHHIALTRRERECLQYSAKGMTAKSIAATLNRSTATVNLHLNSAARKLGARNRV
EAVVRGMHYRLLEL
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacacattggccagcctgggccgtgatctccaggcccgcgagacgctcaatgcc
tgcctggaccgggtgtttcgcgatgtctgcgcgctgggattccagtcgctggtgtacgac
tacgccccggtgccgctgagcatggagggcgcgttgatcaccccctcggtgttcctgcag
cgcaatgcgcccgacgacatgcacaacgtctggtgcgaacacggctattaccagaacgac
ccggtgcagcagcgcgccacccgccgcaccacgccgttcgtatggtcgtaccgcaccgaa
ggtcgcaccgagggcgtggaatacgtgggcgaccagcatcggcaggtcacccgctacctg
tgcgacagcgatatgggcaccggtgtcaccgtgccactgcacctgcccggcggcgcgttt
gcgaccttcagcgcggcagtcaatgtcacccaggccgaggccccacgcctggccgaagcc
cagctgccgccgttcctgctgctggcgcatgcctttcaggcacgcgcgcaggaactgctc
gatccgcaggagcgccgctgccaccacatcgccttgacccgccgcgagcgcgaatgcctg
cagtactcggccaagggcatgactgccaagagcattgccgccacgctcaaccgctccacg
gccaccgtgaacctgcatctgaattcggcggcccgcaaactgggcgcacgcaatcgcgtg
gaagcggtggtacgcggcatgcattaccggctgctggagttgtag
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