Xanthomonas campestris pv. campestris 8004: XC_1607
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Entry
XC_1607 CDS
T00247
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
xcb
Xanthomonas campestris pv. campestris 8004
Brite
KEGG Orthology (KO) [BR:
xcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xcb03016
]
XC_1607
Enzymes [BR:
xcb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
XC_1607
Transfer RNA biogenesis [BR:
xcb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
XC_1607
Prokaryotic type
XC_1607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AAY48673
UniProt:
Q4UWA0
LinkDB
All DBs
Position
1929318..1930244
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AA seq
308 aa
AA seq
DB search
MRPRITFRPLHGILLLDKPAGLSSNNALQAARRLLRAEKGGHTGSLDPLATGLLPLCFGE
ATKIAGLLLGSAKAYDAEIVLGVTTDTDDADGQPLRERSVPALSEAALQAALAPFIGRIQ
QQAPIYSALKQGGEPLYAKARRGEVIEAPVREVEVHAITLTSYASPRLRLRVTCGSGTYI
RSLARDLGEVLGCGAHIAALRRVWVEPFRTPEMITLEALTALVESGADAAQLLLPVAAGL
SDFAQITLDATLAARFRMGQRLRDPAFPEGQVAVFDADGSPAGLGLVDADGRLSPQRLFN
GLNAAAAC
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
gtgagaccccgcatcaccttccgtccgctgcatggcattttgttgctcgacaagccggcc
ggactcagctcgaacaatgcactgcaggccgcccgccggctgctgcgtgccgagaagggc
ggccacaccggcagcctggatccgctggccaccggcctgctgccgttgtgctttggcgag
gccaccaagattgccggcctgttgctgggctcggccaaggcctacgacgccgagatcgtg
ctgggcgtcaccaccgataccgacgatgccgatgggcagccgctgcgtgagcgctcggta
cctgcgctcagcgaggctgcattgcaggcggcgctggcgccgttcatcggccgcatccag
cagcaggcgccgatctattcggcgctcaagcagggcggcgagccgctgtacgccaaggcg
cgccgtggcgaggtcatcgaggcgccggtgcgcgaggtcgaggtgcatgccatcacgttg
accagctatgcgtcgccgcggttgcggttgcgcgtgacctgcggctccggcacctatatc
cgtagcctggcgcgcgaccttggcgaggtgctgggctgtggcgcgcacatcgccgcgctg
cgccgcgtgtgggtggagccgttccgcacgccagagatgatcaccctggaagcgctcacc
gcgctggtcgaatccggcgccgatgcggcgcaattgctgctgccagtggccgccgggctg
agcgattttgcgcagatcacgctcgacgccaccttggcggcgcgctttcgcatggggcag
cggttgcgcgatccggcattcccggaagggcaggttgcggtgttcgatgcggacggcagc
ccagccgggctgggccttgtcgacgcggacggacggctgtcgccgcagcgcctattcaac
ggtctgaacgccgctgcagcttgttaa
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