Xanthomonas citri subsp. citri Aw12879: XCAW_02591
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Entry
XCAW_02591 CDS
T02519
Symbol
hmsH
Name
(GenBank) tetratricopeptide repeat family protein
KO
K11935
biofilm PGA synthesis protein PgaA
Organism
xci
Xanthomonas citri subsp. citri Aw12879
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PgaA_barrel
TPR_19
TPR_14
TPR_16
TPR_17
TPR_2
TPR_11
ANAPC3
TPR_12
TPR_9
Alkyl_sulf_dimr
TPR_20
Motif
Other DBs
NCBI-ProteinID:
AGI08374
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Position
2919066..2921108
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AA seq
680 aa
AA seq
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MFTACVPQAHSGEVRSADVSGASTALTPMQQAEQFRGRQRYADALAIYERVLHADPRDRG
AYTMRALTLSDLGSAQLAAEAMWRHPNWFSQQERERLDNDRVARMIGWASAEPVDATHRY
AETDQALANAARIQRDAPPQAAWEATRLRVDSLVALNQRQRHRDVIANYQALRAEGVDVP
AYVLPTVGDSLMGLRRPAEAESVLRQALQHSPNDFNTQLLLGYALLEQERFDEAMPLFES
LAATQAPWPRREGATSGYENWDRFSADIALATARSAANDNRGAEALLRERAAIGPDNAEL
QAALASIEARRGQTMQALQRNRMALTLDPHQKQARSGVVEAQRDLDRLDLADAAFASLQQ
EYPDDAGLQRLGASLERQRGWQVHLSHAWGRSENDTLTNSTSPLGNHFGSSLLEAESPLL
GERWRVGLRARDDWADFQATRVRYRSFWLGAHYRYDRLDFSAYGGRALDDFDRDGTAWAL
DAGWRFSDAWYGSVAWRTRDPEASLQARRLGITGDSIGAAVRWTPSDESRWELQARQLRY
SDGNRRDQLDLFGSQRLWANPHVLVDGLFAASAGRAEDDRAVDYFNPRHSSAVAAGVRIE
QIGWRRYDDAFRQRLEVTAGPTYQSGFGSRWVPALAYRHLWSLGDGSALSYGVSWSRPVY
DGQREQQLGLDLDFRWGGTP
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
ttgttcaccgcatgtgtgccacaggcgcacagcggcgaagtgcggtctgcggacgtgtct
ggtgcctccactgccctcacccccatgcagcaggccgagcaatttcgcggccggcaacgc
tacgcggacgccttggccatctacgagcgggtcttgcatgccgacccacgcgatagaggc
gcctacacgatgcgcgcgctcacgctcagcgacctcggcagcgcgcaactcgcggccgag
gcgatgtggcggcatccgaactggttttcgcagcaggaacgcgagcgcctggataacgac
cgcgtcgcacgcatgatcggctgggccagcgccgagccggtggatgctacgcatcgctat
gccgagaccgatcaggcgctggccaatgcagcccgcatccagcgcgacgcgcctccacag
gctgcctgggaagcgacacgattgcgcgtggacagcctggtcgcgctcaatcaacgccag
cggcaccgcgatgtgatcgccaactatcaggcgctgcgtgccgaaggcgtcgatgtgccg
gcatacgtgctgccgacggtgggcgattcgctgatggggctgcgccgccctgccgaagcg
gaaagcgtgcttcgtcaagcattgcagcactcaccgaacgacttcaatacgcaattgctg
ctgggctacgcattgctggagcaggaacgcttcgacgaagcaatgccgctattcgaatcc
ctggccgccacgcaagccccatggccgcgccgggaaggtgccaccagcggttacgaaaac
tgggaccgcttcagcgccgatatcgcgctggctaccgcacgttctgcggccaacgataat
cgcggtgcggaggcattgctgcgcgagcgtgcggccattggcccggataatgccgagcta
caagcggcactggcatcgatcgaagcgcgtcgcggccagaccatgcaggcactgcagcgc
aatcggatggcgttgacgctggatccgcatcagaaacaggcgcgcagcggcgtggtggaa
gcgcaacgcgatcttgatcgcctggatcttgcggatgccgcgttcgcgtcgctgcaacag
gagtatccggacgacgccggcctgcaacggcttggcgcatcgctggaacgtcaacgaggc
tggcaggtgcacctgagccatgcctggggacgcagcgagaatgacacgctgaccaacagc
acctcgccgctcggcaatcacttcggcagttcgctgctggaagccgaatcgccgttactc
ggcgagcgttggcgggtgggcctgcgcgcgcgcgatgactgggcggatttccaggccacc
cgcgtgcgttaccgcagcttctggctgggtgcgcattaccgctacgaccgcctggatttc
agcgcgtacggcggccgcgccctggatgatttcgatcgcgacggcactgcctgggcgctg
gatgccggctggcgcttttccgatgcgtggtatggcagcgtcgcctggcgcacacgcgac
ccggaggcctcgctgcaggcgcgccgcctgggcatcaccggcgacagcatcggtgctgcc
gtgcgctggacgcccagcgacgaaagccggtgggaactgcaggcacgccagttgcgttat
agcgacggcaatcgacgcgatcagctggatcttttcggtagccaacgcctgtgggccaac
ccgcatgtcctggtcgatgggctgttcgccgcctcggccgggcgcgccgaagacgaccgc
gcggtcgattacttcaatccacgccatagctctgcagttgccgccggcgtacggatcgaa
cagatcggctggcgccggtacgacgacgcgtttcggcagcgattggaagtgactgccggg
ccgacctaccagtccggcttcggcagccgctgggtacctgcgcttgcctatcgccatctg
tggtcgctgggcgatggcagcgcattgagctacggcgtgagttggtcgcgcccggtctac
gacggccagcgcgaacaacaacttggattggaccttgatttccgatggggaggtacgccg
tga
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