Xiphophorus couchianus (Monterrey platyfish): 114136060
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Entry
114136060 CDS
T05908
Name
(RefSeq) nuclear factor 7, brain-like
KO
K12012
tripartite motif-containing protein 35
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114136060
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
114136060
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRY
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_4
SPRY
zf-C3HC4_3
U-box
zf-RING_5
zf-RING_2
zf-RING_6
zf-Nse
Prok-RING_4
zf-rbx1
zf-RING_10
DUF4618
Perilipin
SidF
PEHE
Motif
Other DBs
NCBI-GeneID:
114136060
NCBI-ProteinID:
XP_027859637
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All DBs
Position
20:3038852..3041604
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AA seq
461 aa
AA seq
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MASRSEENLCCPVCQDIFVDPVVLSCSHSFCKECLKNSWRARPGRSCPVCRKRSDREDPP
VSLTLKRLCESFLQQKFQNASESLCSLHSEKLKLFCLDHQQPVCLICRDSEKHTNHRFRP
IDEAAQQHKKKLQETLKPLKKKLELKKEVKEKFDQTAEHRKVQARHTERQIVEQFKKLHQ
FLAEEEEARLAALREEEEQKRGMMKEKMEALSREIAALSDTVRATEEELRAEDVSFLHIY
KAAVERVQRCPLLEDPQLPSGALIDQAKHLGNLAFNIWSNMKNMVTYTPLVLDPNTANPK
LLLSDDLTGLTLGDEQQLPDNSERFGYAWSVLSSEGFNSGNHSWDVDVGDSEDWELGVLA
ESVQWKGKVEFGLLVMQFYKDKYSAWSPPAPLIFLSVQKKLQRIRVNLDWDGGKLSFSDL
DTNTHIHTFTHTFTDRMFPFFNTEDPLKILPMKISVSKHQL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcttccagatcagaggagaatctctgctgtccagtctgccaggacatctttgttgac
ccggttgttctgtcatgcagtcacagtttctgtaaggaatgtctgaagaactcctggaga
gcaagacctggacgttcatgtcctgtttgtaggaaaagatctgacagagaagatcctcca
gttagtctgaccctgaagagactctgtgaatcattcttacagcaaaaattccaaaatgct
tcagagagtctctgcagtctgcactctgagaaactcaaactcttctgtctggaccatcag
cagccagtttgtctcatttgcagagattcagaaaaacacaccaaccacagattcagaccc
atcgatgaagctgctcagcaacacaagaagaaacttcaggaaactctgaaacctttgaag
aagaaactggagctgaagaaggaagttaaagaaaagtttgatcagacagcagaacacagg
aaggtccaggcccgacacacagagaggcagattgttgagcagtttaaaaagcttcatcag
tttctagcagaggaagaggaggccaggctggctgcactgagggaggaagaggagcagaag
agagggatgatgaaggagaagatggaggctctgagcagagagatagcagctctttcagac
acagtcagagccacagaggaggagctgagagctgaagacgtctcattcctgcacatctac
aaggctgcagtggaaagagtccagcgctgccccctgctggaggatccacagctgccctca
ggagctctgatagaccaggccaaacatctgggcaacctggccttcaacatctggagcaac
atgaagaacatggtgacctacactcctctggttctggacccaaacacggcgaatccaaaa
ctcctgctgtctgatgatctgaccggtttgactttaggagatgaacagcagcttcctgat
aattcagagaggtttggttacgcttggtctgttctgagctctgagggttttaactcaggg
aaccacagctgggatgttgatgttggagacagtgaagactgggaacttggtgtgttagct
gagtctgtccagtggaaggggaaggtagagtttggattgttggttatgcagttctataaa
gataaatattcagcatggtctccacctgctcctctcatatttctctcagtccagaagaaa
ctccagaggatcagagtgaatctggactgggacggaggaaagctgtcgttctctgatctg
gacactaacacacacatacacaccttcacacacaccttcactgacaggatgtttcctttc
ttcaacactgaagatcctctcaaaattctaccgatgaagatctcagtgagcaaacatcag
ctctga
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