Xiphophorus couchianus (Monterrey platyfish): 114139471
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Entry
114139471 CDS
T05908
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
114139471
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114139471
Ion channels [BR:
xco04040
]
Ligand-gated channels
GABA-A
114139471
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
114139471
NCBI-ProteinID:
XP_027865240
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Position
23:complement(25682201..25716189)
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AA seq
450 aa
AA seq
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MWSKEGTSSPVFCLLVLTALWEIRSVNAVSENITLFTLILDRLLDGYDNRLRPGLGDRVT
EVKTNIFVTSFGPVSDTDMEYTIDVFFRQSWRDERLTFHGPMNILPLNNLMASKIWTPDT
FFHNGKKSVAHNMTMPNKLLRIKDDGTLLYTMRLTVHAECPMHLEDFPMDFHSCPLKFGS
YAYTTSEVTYAWTLNASDSVVVEEESSRLNQYDLLGQTVGQERIKSSTGEYTVMTAHFHL
KRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPK
VAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSVVSEKQKKERASVMKKNN
AYAVAVANYAPNVGKDSGTLPTIAKGGAVDPGKARADGKAPEAKKTFNSVSRIDRLSRIM
FPVLFGGFNLVYWATYLNREPVIKDMVPSN
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtggagcaaggagggcacgtcttcaccagtcttctgcctgctggtgctcacggctctc
tgggaaatcagatcggtgaacgccgtgtcggagaacatcaccctgttcacgctcatcctg
gacagactgctggatggatacgacaaccgtctccggccgggtctcggagacagggtaacc
gaggtgaagaccaacatcttcgtcaccagctttgggccggtctcagacaccgacatggag
tacactatagacgttttcttccggcaaagctggagagatgagaggttgacgtttcacggg
ccgatgaacattttgcccttgaacaacctgatggcgagtaagatctggactcctgacacc
ttctttcacaacgggaaaaagtctgtggcgcacaacatgaccatgcccaataaactgtta
cggatcaaagacgacgggactctgctctacaccatgaggttaacagtgcatgccgagtgc
ccaatgcatctggaggatttccccatggactttcactcctgtcctctaaaatttggcagc
tacgcctacacaacctcagaggtgacttacgcttggaccttaaatgcttccgactcggtg
gtggtggaagaggagagctcccgcctgaaccagtacgacctgcttggtcaaactgttgga
caggaacgcatcaaatcgagcacaggtgaatacactgtgatgacagctcatttccaccta
aagaggaagattggttactttgtcattcaaacgtacctcccgtgcatcatgacagtcatc
ctttcccaggtgtcattttggctaaacagagaatcggtccctgctaggactgtgtttggc
gtgaccacggtcctcaccatgaccactctgagcatcagcgcgaggaactccctgcccaag
gtcgcctacgccaccgccatggactggttcatcgccgtctgctacgccttcgtgttctcc
gctctgatcgagttcgccactgtcaattacttcacaaagcgcggctgggcctgggatggg
aagagtgttgtgagtgagaagcagaagaaagagagggcttctgtgatgaagaagaacaac
gcctacgccgtagcggtggccaactacgcgccgaacgttggcaaggactccggcacgctc
ccgaccatcgccaaaggcggcgccgtggatcccggcaaggccagagcggacggcaaggcc
ccggaagccaagaagacgttcaacagcgtcagcaggattgacaggctgtcgcggattatg
ttcccggttctcttcggcggcttcaacctcgtctactgggccacctacctaaacagagaa
ccggttataaaggatatggtcccgtccaactag
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