Xiphophorus couchianus (Monterrey platyfish): 114147902
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Entry
114147902 CDS
T05908
Symbol
rad23a
Name
(RefSeq) UV excision repair protein RAD23 homolog A
KO
K10839
UV excision repair protein RAD23
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03420
Nucleotide excision repair
xco04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
114147902 (rad23a)
09124 Replication and repair
03420 Nucleotide excision repair
114147902 (rad23a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
xco03051
]
114147902 (rad23a)
03400 DNA repair and recombination proteins [BR:
xco03400
]
114147902 (rad23a)
Proteasome [BR:
xco03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
114147902 (rad23a)
DNA repair and recombination proteins [BR:
xco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
114147902 (rad23a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
Rad60-SLD_2
UBA_3
Crinkler
Dsc3_N
DUF3306
Ubiquitin_2
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
114147902
NCBI-ProteinID:
XP_027878471
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All DBs
Position
7:27484129..27496377
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AA seq
369 aa
AA seq
DB search
MQITLKTLQQQTIQIEIDPEQTVKALKEKIEAERGKDNFPVSGQKLIYAGKILQDDTPIK
DYKIDEKNFVVVMVSKTKPAAPASPPVSEAPKLPVQDSGSTSTPAPATNPTPAPAPAPAP
TPAAVPISSEEAKPEPNTAATEPQQPASSSGVSQGLDASSTLVTGAEYEAMLTEIMSMGY
ERERVVAALRASFNNPHRAVEYLLTGIPSSPVQESNPPAQAPTSGPTEPPSLAEGENPLA
FLRTQPQFLHMRQAIQQNPALLPALLQQLGRENPQLLQQISQHQELFIQMLNEPVGEGGD
APEVGEMGAAGEEGAPVNYIQVTPQEKEAIERLKALGFPEALVIQAYFACEKNENLAANF
LLNQGLEDD
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcacgctgaaaacactgcagcagcagactattcagattgagatagaccccgaa
caaacggtgaaggccttgaaggagaagatcgaggctgaacggggaaaggacaacttcccc
gtttctgggcagaagctgatttatgccgggaaaatcttgcaagatgacacgcctattaaa
gactacaagatcgacgagaagaattttgtcgtagtgatggtgtccaagactaaacctgcg
gctccagcctcaccgccagtctcagaagcccccaagctgcctgtacaagactctggctcc
acctccacccccgccccggctacaaaccccactccggcccccgccccggctccggccccg
acccccgcagctgtccccatttcttcagaggaggccaaaccggagcccaacacggcagcc
acagaaccccagcagccagccagctccagtggtgtcagtcagggcctggacgcctcctca
acgctcgtgactggagccgagtacgaggccatgctgacagagatcatgtctatgggctac
gagagggagcgagtggtagctgcactacgggccagcttcaacaaccctcacagagcggtg
gagtacctcctcactggtatccccagcagcccagttcaggagagcaacccaccggcccag
gcccccacatctggccccacggagcctccgtctctagcagaaggtgagaacccactagca
ttcctgagaacccagccgcagttcctgcacatgaggcaggccatccagcagaacccggct
ctgctcccagcactcctgcagcaactgggccgagagaacccacagcttctacagcaaatc
agccaacaccaggagctgttcatccagatgctgaacgagccggtgggagaaggaggcgac
gccccggaggtcggcgagatgggggcggcgggcgaagagggcgcgcccgtcaactacatc
caggtcacaccgcaggagaaggaagccatcgaaaggttaaaagctctgggtttccccgag
gcgctggtcatccaggcctacttcgcctgcgagaagaacgagaacctggcggccaacttt
ctcctcaaccagggactggaagacgactga
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