KEGG   Xiphophorus couchianus (Monterrey platyfish): 114148092
Entry
114148092         CDS       T05908                                 
Name
(RefSeq) integrin alpha-6-like isoform X1
  KO
K06485  integrin alpha 6
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04510  Focal adhesion
xco04512  ECM-receptor interaction
xco04514  Cell adhesion molecules
xco04810  Regulation of actin cytoskeleton
xco04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:xco00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    114148092
   04514 Cell adhesion molecules
    114148092
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    114148092
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    114148092
   04810 Regulation of actin cytoskeleton
    114148092
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xco04147]
    114148092
   04515 Cell adhesion molecules [BR:xco04515]
    114148092
   04090 CD molecules [BR:xco04090]
    114148092
Exosome [BR:xco04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   114148092
  Exosomal proteins of breast milk
   114148092
Cell adhesion molecules [BR:xco04515]
 Integrins
  Integrin alpha subunits
   114148092
CD molecules [BR:xco04090]
 Proteins
  114148092
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 Integrin_alpha Protocadherin
Other DBs
NCBI-GeneID: 114148092
NCBI-ProteinID: XP_027878838
LinkDB
Position
7:15778927..15800495
AA seq 1083 aa
MVLLQQRGHFAVQAALFLLCHLLEPSGLRAFNLDTRHVIRKGGEPGSLFGFSLALHQQVN
PNKVLLLIGAPRAKALKNQKSNVTGGLFKCEISESDNCERIEFDNDEDPRQESKQDQWMG
VSVQSQGPGGKVVTCAHRYQKHSRVSQSVLGRCYVFSQNLTINYDDMDGGQWKFCEGRRG
ETDHAWYGVCQQGLGVTFTKDYHYVVFGAPGARNWKGMVRVEQKNITLIERGIYNDGPYE
YENDNDNFKHPNNPVSAHSYLGFSLDTGHHIMKSRDLTVVAGAPRANHKGLVALLKKKFI
EQLVVEQLLHGPGLGSSFGYDVAVVDLNGDGWQDIVVGAPYFYMKDTDIGGAVYVYINTA
GQWDNVTPIRLNGTKDSVFGLAVENIGDVNQDSFNDIAVGAPQDDEGAGRVYIYHGSAQG
IKTTPAQILSGKEHSLRYFGYSLAGNMDLDGNSYPDLAVGSLSDAALIYRARPIVNIRKN
ITVSPEEIDLSVGCDSSFCFTVKACFNYTATSYNKRLTISYFIEADGDRRKQGLNSRVIF
LTKTHPESDVQFNGTLELQNQNAGQCVSINVGLKDNIKDKMRSVVFEVSAEIIKAKLKKM
GNGLPQIMPVLDATQPRQAVTEVNFVKEGCKNKRICYSNLKMENSLHYIPISRNEFTPLS
KSAHNIPEFKLTYEKKDLAVKVTVTNKNGDDAYEAKLVGKFPEILSYSGVRSSNKQILCT
ANHNGSEAECELGNPFKSNSKVMFYIILSTAHNAVKLNTTEFEIDLHLQTTSSQNISSVK
IKSKVITEFPLTLSGEAKPSQVSFGGVVRAETAMKTEEDAGSLINFTFRISNLWTPSISP
PPVTLHIHWPRDNKDGKWLLYLVKVTSHGPEKIACSPQSEIHSLKDIWKRSPSLTKQEIV
KKERKLGGKIAFRSSSTKVLSCEKESKCVVLKCPLQGIDGTAVELRSRLWNSTFIEEYAS
FPTITLVVKASLVLESQAQNIILKSPDFTVKVPVSPDSDVAQFGVPWWIILIAVLAGILI
LALMVFLLWKCGFFRRSKQDDSIPRYHAVRIKKETPGHSDGKMKPGALEKKQWMTTWIND
DYS
NT seq 3252 nt   +upstreamnt  +downstreamnt
atggtgctgctgcagcagagaggacactttgctgtccaggctgcgcttttccttctctgt
catctgctggagccgagcggactgcgcgctttcaacctggacacccgtcatgtcatcagg
aaaggcggggagccggggtctctcttcggcttctccctcgccttgcaccagcaagtcaac
ccgaataaagtcctgttactaattggtgccccgagagccaaggctttaaaaaaccaaaaa
tccaatgtgactgggggcctttttaagtgcgaaatctctgagtctgataattgtgagcgc
attgaatttgataatgacgaggatccaaggcaggagagtaagcaggaccagtggatgggt
gtgtctgtgcagagtcagggacccgggggaaaggttgtgacatgtgcgcatcgatatcaa
aagcatagcagagtttcccagtctgtcctcggtcgctgttatgtcttcagtcagaatttg
accatcaactacgatgatatggatggaggtcaatggaaattttgtgaagggagacgagga
gaaaccgaccatgcatggtatggagtgtgtcaacaaggtctgggggtcaccttcaccaag
gactaccattatgtggtgtttggagccccaggagcaagaaactggaaagggatggtacga
gtggaacaaaaaaacatcacgttgatagaaaggggtatatataacgatggaccgtatgag
tatgaaaacgacaacgacaactttaaacaccccaacaaccctgtgtcagcccacagctac
cttgggttctctctggacaccgggcaccacatcatgaagagccgtgacctgaccgtggtg
gctggcgcaccgagagccaatcacaagggacttgtagccctgctgaagaaaaaatttatc
gagcaactcgtagtggagcaacttctgcatgggccgggactgggatcctcatttggatac
gatgtggccgtggttgacctgaatggtgatggatggcaagacattgtcgtgggagcccct
tacttctacatgaaggacacagacatcggtggagccgtttatgtttatatcaacacagca
ggacagtgggataacgtaactccgattcgcctaaacgggaccaaagattcagtgttcgga
ctggcagtggaaaacatcggggatgttaatcaggactcatttaatgatattgcagttgga
gctccacaggacgatgagggggcaggaagagtctacatttatcatggatctgcacaaggg
ataaaaacaactcctgcacagatcctttcaggcaaagagcacagccttcgatattttgga
tattctctggcaggaaacatggacctggatggtaactcttatccagacctggctgtagga
tctctgtcagatgcagctttgatttacagggcgagaccaattgttaacatcaggaaaaac
attacggtttctcctgaggaaattgacctcagtgttggctgtgattccagtttttgcttc
actgtgaaagcatgtttcaactacacagcgacatcctacaacaagaggctcacaatcagc
tacttcatagaggcagatggagaccgcaggaaacaaggactgaactccagagtgattttt
ctgactaagactcatcctgaatcagacgtccagtttaatggcaccttggagctccagaat
caaaacgcaggacagtgtgtcagcataaacgtcgggcttaaggacaacattaaggacaag
atgcgcagcgttgtctttgaagtttctgcagaaattatcaaagcaaaactaaaaaaaatg
ggaaatggtctacctcagataatgccagttttagacgccacccagccacggcaagccgtc
acagaggtaaactttgtaaaggagggatgtaaaaataaaaggatttgttatagcaattta
aaaatggagaacagtctgcactacataccaatcagcaggaatgaattcaccccgttaagc
aaaagcgcacataatataccagagtttaagctgacttacgagaagaaggacttggctgtg
aaggtgactgtgaccaataaaaatggtgacgatgcctacgaagcaaagcttgtggggaaa
ttcccagaaatcctgtcgtattctggagttcgatcttcaaacaagcagatcctctgtact
gccaaccataatggatctgaagcagagtgtgagctgggaaacccatttaagagcaactca
aaggtcatgttttacatcattctgagcactgcgcacaatgctgtaaaactcaataccact
gagtttgagattgatctgcacctccaaacgacaagttctcaaaatatttcctctgtgaaa
ataaagagcaaagtgataactgaatttcctttaacattgagtggtgaagccaaacccagt
caggtttcctttggaggtgttgtgagagcagaaactgcaatgaaaacagaagaggatgct
ggaagtttgattaattttacatttaggataagtaacttgtggacgccttcgatctctcct
ccccccgtcactctacacattcattggcccagagacaataaagatgggaaatggcttctg
tacttggtgaaggtcacatctcatggacctgagaaaatcgcctgctctcctcaatctgaa
attcactctctcaaagacatttggaagagatctccttccctgacaaaacaggaaattgtc
aaaaaagaaagaaaacttggtggcaaaattgcttttcgttcaagcagtactaaagttttg
tcctgtgagaaggaaagcaaatgtgtggtgctaaagtgccctctgcaggggattgatggt
actgcagttgagctgagatctcgtttgtggaactccaccttcatcgaggaatatgcttcc
tttccaaccataactttagttgtgaaggcttcacttgtacttgagtctcaggctcagaac
attatcctgaaatctcctgactttactgtgaaggtgcccgtatccccagacagcgacgtg
gctcagttcggagttccttggtggatcattcttatagcggttctggcaggaatcttgatt
ttggcattgatggtgtttctgttgtggaagtgcgggttcttcagacgctccaaacaagac
gacagcatacctcgctaccacgcagtgcggataaaaaaggaaactccgggccacagcgat
ggaaaaatgaaacctggtgctttagaaaagaagcagtggatgacgacgtggataaacgac
gattattcatga

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