Xiphophorus couchianus (Monterrey platyfish): 114148092
Help
Entry
114148092 CDS
T05908
Name
(RefSeq) integrin alpha-6-like isoform X1
KO
K06485
integrin alpha 6
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04510
Focal adhesion
xco04512
ECM-receptor interaction
xco04514
Cell adhesion molecules
xco04810
Regulation of actin cytoskeleton
xco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114148092
04514 Cell adhesion molecules
114148092
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114148092
09142 Cell motility
04820 Cytoskeleton in muscle cells
114148092
04810 Regulation of actin cytoskeleton
114148092
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xco04147
]
114148092
04515 Cell adhesion molecules [BR:
xco04515
]
114148092
04090 CD molecules [BR:
xco04090
]
114148092
Exosome [BR:
xco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
114148092
Exosomal proteins of breast milk
114148092
Cell adhesion molecules [BR:
xco04515
]
Integrins
Integrin alpha subunits
114148092
CD molecules [BR:
xco04090
]
Proteins
114148092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
Protocadherin
Motif
Other DBs
NCBI-GeneID:
114148092
NCBI-ProteinID:
XP_027878838
LinkDB
All DBs
Position
7:15778927..15800495
Genome browser
AA seq
1083 aa
AA seq
DB search
MVLLQQRGHFAVQAALFLLCHLLEPSGLRAFNLDTRHVIRKGGEPGSLFGFSLALHQQVN
PNKVLLLIGAPRAKALKNQKSNVTGGLFKCEISESDNCERIEFDNDEDPRQESKQDQWMG
VSVQSQGPGGKVVTCAHRYQKHSRVSQSVLGRCYVFSQNLTINYDDMDGGQWKFCEGRRG
ETDHAWYGVCQQGLGVTFTKDYHYVVFGAPGARNWKGMVRVEQKNITLIERGIYNDGPYE
YENDNDNFKHPNNPVSAHSYLGFSLDTGHHIMKSRDLTVVAGAPRANHKGLVALLKKKFI
EQLVVEQLLHGPGLGSSFGYDVAVVDLNGDGWQDIVVGAPYFYMKDTDIGGAVYVYINTA
GQWDNVTPIRLNGTKDSVFGLAVENIGDVNQDSFNDIAVGAPQDDEGAGRVYIYHGSAQG
IKTTPAQILSGKEHSLRYFGYSLAGNMDLDGNSYPDLAVGSLSDAALIYRARPIVNIRKN
ITVSPEEIDLSVGCDSSFCFTVKACFNYTATSYNKRLTISYFIEADGDRRKQGLNSRVIF
LTKTHPESDVQFNGTLELQNQNAGQCVSINVGLKDNIKDKMRSVVFEVSAEIIKAKLKKM
GNGLPQIMPVLDATQPRQAVTEVNFVKEGCKNKRICYSNLKMENSLHYIPISRNEFTPLS
KSAHNIPEFKLTYEKKDLAVKVTVTNKNGDDAYEAKLVGKFPEILSYSGVRSSNKQILCT
ANHNGSEAECELGNPFKSNSKVMFYIILSTAHNAVKLNTTEFEIDLHLQTTSSQNISSVK
IKSKVITEFPLTLSGEAKPSQVSFGGVVRAETAMKTEEDAGSLINFTFRISNLWTPSISP
PPVTLHIHWPRDNKDGKWLLYLVKVTSHGPEKIACSPQSEIHSLKDIWKRSPSLTKQEIV
KKERKLGGKIAFRSSSTKVLSCEKESKCVVLKCPLQGIDGTAVELRSRLWNSTFIEEYAS
FPTITLVVKASLVLESQAQNIILKSPDFTVKVPVSPDSDVAQFGVPWWIILIAVLAGILI
LALMVFLLWKCGFFRRSKQDDSIPRYHAVRIKKETPGHSDGKMKPGALEKKQWMTTWIND
DYS
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgctgcagcagagaggacactttgctgtccaggctgcgcttttccttctctgt
catctgctggagccgagcggactgcgcgctttcaacctggacacccgtcatgtcatcagg
aaaggcggggagccggggtctctcttcggcttctccctcgccttgcaccagcaagtcaac
ccgaataaagtcctgttactaattggtgccccgagagccaaggctttaaaaaaccaaaaa
tccaatgtgactgggggcctttttaagtgcgaaatctctgagtctgataattgtgagcgc
attgaatttgataatgacgaggatccaaggcaggagagtaagcaggaccagtggatgggt
gtgtctgtgcagagtcagggacccgggggaaaggttgtgacatgtgcgcatcgatatcaa
aagcatagcagagtttcccagtctgtcctcggtcgctgttatgtcttcagtcagaatttg
accatcaactacgatgatatggatggaggtcaatggaaattttgtgaagggagacgagga
gaaaccgaccatgcatggtatggagtgtgtcaacaaggtctgggggtcaccttcaccaag
gactaccattatgtggtgtttggagccccaggagcaagaaactggaaagggatggtacga
gtggaacaaaaaaacatcacgttgatagaaaggggtatatataacgatggaccgtatgag
tatgaaaacgacaacgacaactttaaacaccccaacaaccctgtgtcagcccacagctac
cttgggttctctctggacaccgggcaccacatcatgaagagccgtgacctgaccgtggtg
gctggcgcaccgagagccaatcacaagggacttgtagccctgctgaagaaaaaatttatc
gagcaactcgtagtggagcaacttctgcatgggccgggactgggatcctcatttggatac
gatgtggccgtggttgacctgaatggtgatggatggcaagacattgtcgtgggagcccct
tacttctacatgaaggacacagacatcggtggagccgtttatgtttatatcaacacagca
ggacagtgggataacgtaactccgattcgcctaaacgggaccaaagattcagtgttcgga
ctggcagtggaaaacatcggggatgttaatcaggactcatttaatgatattgcagttgga
gctccacaggacgatgagggggcaggaagagtctacatttatcatggatctgcacaaggg
ataaaaacaactcctgcacagatcctttcaggcaaagagcacagccttcgatattttgga
tattctctggcaggaaacatggacctggatggtaactcttatccagacctggctgtagga
tctctgtcagatgcagctttgatttacagggcgagaccaattgttaacatcaggaaaaac
attacggtttctcctgaggaaattgacctcagtgttggctgtgattccagtttttgcttc
actgtgaaagcatgtttcaactacacagcgacatcctacaacaagaggctcacaatcagc
tacttcatagaggcagatggagaccgcaggaaacaaggactgaactccagagtgattttt
ctgactaagactcatcctgaatcagacgtccagtttaatggcaccttggagctccagaat
caaaacgcaggacagtgtgtcagcataaacgtcgggcttaaggacaacattaaggacaag
atgcgcagcgttgtctttgaagtttctgcagaaattatcaaagcaaaactaaaaaaaatg
ggaaatggtctacctcagataatgccagttttagacgccacccagccacggcaagccgtc
acagaggtaaactttgtaaaggagggatgtaaaaataaaaggatttgttatagcaattta
aaaatggagaacagtctgcactacataccaatcagcaggaatgaattcaccccgttaagc
aaaagcgcacataatataccagagtttaagctgacttacgagaagaaggacttggctgtg
aaggtgactgtgaccaataaaaatggtgacgatgcctacgaagcaaagcttgtggggaaa
ttcccagaaatcctgtcgtattctggagttcgatcttcaaacaagcagatcctctgtact
gccaaccataatggatctgaagcagagtgtgagctgggaaacccatttaagagcaactca
aaggtcatgttttacatcattctgagcactgcgcacaatgctgtaaaactcaataccact
gagtttgagattgatctgcacctccaaacgacaagttctcaaaatatttcctctgtgaaa
ataaagagcaaagtgataactgaatttcctttaacattgagtggtgaagccaaacccagt
caggtttcctttggaggtgttgtgagagcagaaactgcaatgaaaacagaagaggatgct
ggaagtttgattaattttacatttaggataagtaacttgtggacgccttcgatctctcct
ccccccgtcactctacacattcattggcccagagacaataaagatgggaaatggcttctg
tacttggtgaaggtcacatctcatggacctgagaaaatcgcctgctctcctcaatctgaa
attcactctctcaaagacatttggaagagatctccttccctgacaaaacaggaaattgtc
aaaaaagaaagaaaacttggtggcaaaattgcttttcgttcaagcagtactaaagttttg
tcctgtgagaaggaaagcaaatgtgtggtgctaaagtgccctctgcaggggattgatggt
actgcagttgagctgagatctcgtttgtggaactccaccttcatcgaggaatatgcttcc
tttccaaccataactttagttgtgaaggcttcacttgtacttgagtctcaggctcagaac
attatcctgaaatctcctgactttactgtgaaggtgcccgtatccccagacagcgacgtg
gctcagttcggagttccttggtggatcattcttatagcggttctggcaggaatcttgatt
ttggcattgatggtgtttctgttgtggaagtgcgggttcttcagacgctccaaacaagac
gacagcatacctcgctaccacgcagtgcggataaaaaaggaaactccgggccacagcgat
ggaaaaatgaaacctggtgctttagaaaagaagcagtggatgacgacgtggataaacgac
gattattcatga
DBGET
integrated database retrieval system