Xiphophorus couchianus (Monterrey platyfish): 114149142
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Entry
114149142 CDS
T05908
Name
(RefSeq) laminin subunit gamma-3-like
KO
K06247
laminin, gamma 3
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04510
Focal adhesion
xco04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114149142
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114149142
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
Laminin_EGF
Laminin_B
Filo_VP35
Motif
Other DBs
NCBI-GeneID:
114149142
NCBI-ProteinID:
XP_027880567
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All DBs
Position
8:complement(20925339..21061339)
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AA seq
1638 aa
AA seq
DB search
MAATFALSSPILALVFSHFLHHYCPVWAAMDTCYDEKGASSRCMPKFENVAFNRTVVVSN
VCGSPPEDYCMQTGSTRSCHYCDASDPELNHNASLLTDFNRNEEPTWWQSQSMYYGIQYP
NSVNLTLHLGKAFEITYIRLKFHTSRPESFAIYKRTEKDGPWLPYQYYSASCGKTYRRNT
KGYIRPGEDERTAVCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDQSLALQEWVTATDLL
ISLDRLNTFGDEFFKDPKVLRSYFYAISDFSVGGRCKCNGHASECVEGEQGGLVCACQHH
TVGTDCQRCHPFYQDRPWAKATGDSANECLKCNCSGRSDECVFDMEQYRSTGSGGRCVSC
RDNTNGPHCERCKENHYRKDPEEACLPCNCNINGSLSLQCDREGRCRCRVGVTGEKCDTC
QAGFHSLGPGGCRPCECEPSGSLDQCSPLDGHCYCKPNVEGQSCNRCKPGFFNMQREHPA
GCQPCFCFGHSFACYSANHYRAIDITSDFNEDQDGWWGEFSGGLKYPLLWKEGEVYLLPL
NEEDTGFYRAPEKFLGHKVNSYGQLLSITFTSETSELLPDRVTLLLQGSGTALSADLSYQ
PLPDVDPSLTPRRSFSVRLHEYEASFRPHLSAFEFQRLLHNLTALKISNAGGHNYTSQLA
GVTLTSASSFSSPTSAPAPWVEACSCPRGFAGEFCERCAPGFTREDPGRGPFSTCVSCSC
HQHGTCHPETGVCECLDFTGGTTCERCLDGYYGNALIGTRGDCQACPCPGLSSCAQIAET
GQVVCTNCPAGQTGVRCQICEDGYYGDPLGTSGTSRPCAKCTCNGNVDFNAVGVCDHFTG
RCLKCLGHTEGDQCQRCKQGFYGDALNQAARQKCRPCRCNAAGTAGPVDECHPMTGNCRC
LAHVTGRDCSHCEVGFFNLQPGIGCERCKCNPVGSVSMACHPITGECVCRAGVEGTLCGS
CRVGFFGFSSHGCRACNCDPMGSASMQCHGNGTCQCRRGFVGHKCDKCEMNYFYDRATHQ
CEECPVCYGLVKKHAEKLQTRLQDLDKLLAHFDCRGRFGKRHHPLKYATTGLYEGEHQRE
DTFPNALEDFLAFQEAREAFIKQFSLLEASAGALSAQLHGITFALNCSISLTVEEDEDEG
KDEESTGACRTFTKILLMIRVSRDQLKQATLDLDNVVISFEAMSAPNKWSIMVNDSQVLM
KSHRETADHIEAVASRAVRESKQAFNFLMDLLQDNSTEEYTRNLKEQITRMQQQKENLTV
LLNVTVAEHLALVEEDASFKLAVGNITSSLHQLTLMDAGAASDMNQTEFNQTHPDNSTAQ
LSEDILKQTEELDQEIQTKENLISNISKEMASVKQTVLKNLEEVDAIKMLQGNVQEAKAS
ALTSVVMGKEVESDVITIHREVENMVKEWPRRQAQTKTALKKQRPQEEKVLSEVRKKVKQ
IEKMLDPARENASLTRNITKEAEQMAHDVAKGSKAILTQAKHTRTAASQLNSQIDSALNK
LSERELLTEKAKSMIPTEPEVSLSSIKNDMEAAKLQLEAYSVTLRELISKIDGSVPLERF
HRILNETERRLSMLRGSVESPALGSKIQKLHSAAKEQKSRLSLIEQDIQEIREERESLGD
IASNLPQSCPQALGEGKA
NT seq
4917 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaacttttgctttgagttctcctatattggctcttgtcttttctcatttcctg
caccactactgtccggtttgggccgcaatggacacctgctatgatgagaagggggcctca
agccgttgcatgcccaagtttgagaatgttgccttcaatcgcactgtagtggtgtcaaac
gtgtgtggttctccacctgaggactactgcatgcagaccggctcaacgcgctcgtgtcac
tactgtgatgcatcagaccctgagctgaaccacaacgccagcctcctgacagactttaac
aggaatgaggagcccacatggtggcaaagccagtccatgtactatggcatccagtacccc
aattctgtcaaccttacccttcaccttggcaaagcctttgagataacatacatccgttta
aagttccacaccagccggccggagagctttgccatatacaagcgtacagaaaaggatgga
ccgtggttaccatatcagtattacagtgcttcatgtgggaagacatataggaggaataca
aaaggttacattcgccctggagaagatgaaaggaccgcagtttgtacagacgagttcagt
gatatctcccctctcactggaggaaatgtggctttttctaccctggaaggtcggcccagt
gcctacaactttgaccaaagcctggcattgcaggaatgggtgacagccactgacctgctc
atctctttggacaggctgaatacctttggggacgagttttttaaggatcccaaagttctg
cgctcgtatttttatgccatctctgatttttctgtgggtgggagatgcaagtgcaacggc
catgccagcgagtgtgttgagggggaacagggtggcctggtgtgtgcctgccaacatcac
acagtgggaaccgactgccagagatgtcaccccttttaccaggacagaccttgggccaag
gccactggggattccgccaacgagtgtttgaagtgcaactgcagtgggagatcagacgag
tgcgtgtttgacatggagcagtacaggagcactggcagcggggggcgctgtgtgagctgc
agagacaacaccaatggtccccactgcgaacgatgcaaggaaaatcactacaggaaggat
ccggaagaggcgtgcctgccctgcaactgcaatatcaatggctcattaagtttgcagtgt
gatagagaaggaaggtgtcggtgtcgagttggcgtgacaggagagaagtgcgacacgtgt
caggctggcttccactcattgggtccaggtggctgcaggccgtgtgagtgcgagcccagc
gggagtttggatcagtgctcccccctggatgggcattgctactgtaagccaaacgtggag
gggcagagctgcaatagatgcaagccaggatttttcaacatgcaaagagagcacccagca
gggtgccagccatgtttctgctttggtcactcattcgcctgctactcagccaatcactac
agagccattgacatcacctcagacttcaatgaagatcaggatggttggtggggagagttc
tctggaggcctgaagtaccccctgctgtggaaggaaggtgaagtctacctgctgcctctt
aatgaggaagacaccggtttctacagagcccccgagaaattcctgggtcacaaagtcaac
agctacggccagctcctctccatcaccttcacctctgaaacctctgagttgctccctgac
cgcgtcacactgctgctccaaggatctggaactgccctgtcagcagacctttcctaccag
ccactgccagatgtcgaccccagcctcaccccacggcgctccttcagtgtcaggctccat
gaatatgaggcgagcttcaggcctcatctgtctgcctttgagttccagcgcctccttcac
aacctgacggctctgaaaatcagcaatgctgggggacacaactacacatcacagcttgcg
ggggtaaccctgacctccgcttccagcttctccagtccaaccagtgctcccgctccgtgg
gtggaagcttgctcatgtcctcgaggctttgcgggcgagttttgcgagcggtgcgccccg
ggattcaccagagaagaccccggcagagggcctttctcgacatgtgtgtcgtgcagctgc
caccagcatggaacatgtcatccagaaacaggggtgtgcgagtgcttggatttcaccggc
gggacgacctgtgagcgctgcctggatggttactatggcaacgctttgattggcactcgt
ggtgattgtcaggcctgcccttgcccaggtctcagcagctgcgcccagattgcagagacc
ggacaggtggtctgcaccaactgccctgcaggacagacaggcgtgcgctgtcagatttgt
gaagatggctactacggcgaccccctgggaacgtcggggacgtctcgcccctgcgcaaag
tgcacctgcaacggaaatgtggatttcaacgccgtgggagtctgtgaccactttactggg
cgatgcctgaagtgcctcgggcacacagagggcgaccagtgccagcgctgtaagcagggc
ttttatggggacgccctgaaccaagctgccagacagaagtgcagaccatgtcgctgcaac
gctgcgggaaccgccgggcctgttgacgaatgccaccccatgacaggaaattgccgttgc
ctcgctcatgtgaccgggcgagattgcagccactgtgaagtcggcttcttcaaccttcag
cctggcattggatgcgaaaggtgtaaatgtaacccagtcggctcggtgtcgatggcttgc
catccaatcacgggggagtgcgtgtgtcgcgcaggggtggaggggaccctgtgtggctcc
tgccgtgtgggcttttttggattctcctcacacggctgcagagcctgtaactgtgacccg
atgggctccgcttccatgcagtgtcacggcaacggcacctgccagtgccgccggggcttc
gtgggtcacaagtgcgacaaatgtgagatgaattatttctatgaccgagccactcaccag
tgtgaggagtgtccagtttgctacggcctcgtcaaaaaacatgccgaaaagcttcagact
cgtcttcaggatttggacaagctcctggctcactttgattgccgaggtagatttgggaag
cgccaccacccactgaagtacgccacgacggggctttatgaaggggagcaccagagggaa
gatacttttcccaacgcgctggaggattttctggccttccaagaggcacgggaggccttc
ataaaacaattttccttgctggaagcttcagcgggcgcactttcagctcagctccacggc
attacatttgctttgaactgcagcatcagcttgacggtggaggaagacgaggacgagggg
aaggatgaggaaagtacaggagcgtgtcgaaccttcaccaaaatcctgttgatgatcagg
gtatccagggatcagctgaagcaggcaacgctggatctggacaatgtggtcatttccttt
gaagccatgtcagcgcccaacaaatggagcataatggtcaatgactcccaggtcctaatg
aaaagtcacagagaaacggcggaccacattgaggccgtagccagcagggcggtgcgtgag
tcaaagcaggctttcaacttcctgatggatctactgcaggacaactccacagaggagtac
accaggaatctgaaagagcaaataacccgaatgcagcagcagaaggaaaacctcactgtg
ctgctaaatgttactgtagctgaacatctggccctggtggaagaagatgcctctttcaag
cttgctgtgggtaacatcacatcatccttacatcagctgactctgatggatgccggagca
gcatctgacatgaaccaaacagagttcaaccaaacacatccggacaactccactgcacag
ttgagtgaggacattttaaaacagacagaagagctggaccaagaaattcagaccaaagaa
aatctcatcagtaacatcagcaaggagatggcatcggtaaaacagacagtcttgaaaaac
cttgaagaagtagacgcaataaaaatgctgcaagggaatgttcaggaggcaaaagcttct
gctttgacatcagtggtgatgggcaaagaagtggagtcagacgtcattaccatccataga
gaagtagaaaacatggtgaaagagtggccccgccggcaggctcagaccaagacggcatta
aagaagcaaagaccccaggaagaaaaggtcctttcagaggtcaggaagaaggtcaagcaa
attgagaagatgctagatcctgcgagggaaaacgccagcctcacaaggaacatcacaaag
gaggcagagcaaatggcacacgatgtggctaagggatccaaagccattctgacccaagcc
aagcatacaaggactgcagcttctcaacttaactcacaaatagactctgctttaaataag
ttatcagaacgagaattactaacagagaaagcaaaatccatgatcccaacagagcctgaa
gtgtcactttccagcataaagaatgacatggaagcagctaaactccagttagaggcatat
tctgttacgctaagggaactaatcagcaaaatagacgggagcgtgcctctggagcgcttc
catcgaatcctaaacgaaacagagcgccgtctgagcatgctgcgtgggagtgtggagagc
ccggcgctgggctccaagatccagaagctgcactctgctgctaaagaacagaagagccgc
ctgtccctcatcgagcaggacatccaggagataagggaggagagagagagtctcggggac
attgcctccaacctgcctcagtcctgcccccaggccttgggagaaggtaaagcctag
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integrated database retrieval system
