Xiphophorus couchianus (Monterrey platyfish): 114153395
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Entry
114153395 CDS
T05908
Symbol
rnf43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
114153395 (rnf43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114153395 (rnf43)
Enzymes [BR:
xco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114153395 (rnf43)
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114153395 (rnf43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
FANCL_C
DUF5305
Motif
Other DBs
NCBI-GeneID:
114153395
NCBI-ProteinID:
XP_027887732
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All DBs
Position
11:complement(24484074..24586929)
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AA seq
809 aa
AA seq
DB search
MTVPLRRLAGLWPWLLMAALQVVLGQPSMESGLRAVINVTLVKDPTGKPIVLKGEFVGGS
AGNAQGKLKQYHPVSLCNTSEDERQDSGFITIVKLEQLGPHCSPLLDKARIALERGAQAV
IFDVSDVAIADAELKNTDSLPHPVVLIKGADAKKLMNLVNHNEEATVVIEAKVEPKWPHY
DVSILLTIVLVILTIVLIFAFRYKCKSNRTWDSVHQQTVRAISRLETRIYRSQTCSGSQR
HRGAWGSATSSNSSPVCAICLEEFQDGQNVRIISCAHEFHRDCVDPWLMQHRTCPLCMHN
IMGTERQPQRNRNQQSSEQSQSFLHPQQYSNPHSHPFPQHAIPFSMRPHYPRGPSGPYPN
LGHYSGSSPMDAQTLHFLSSRQLGAGCGFHLPMDVPGRPHRLGTGCRTSAHHYASRRSCH
TYRSSCQAQRNASGSRLQHGASAAAQSRGMAGNGRQDDGSCSGGSYHTERSGYLADGPAS
DSSSGPWHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDYDPFGYFGTGPAAGVGSGHV
PRRNSLEATAQNRPKSLDSVVNKAGCLEEQPQTVFSHIHYHRHRHHHYEEGEHGQRPSRC
SDEEQGAAASAPGQDKDSPPCPPKHSPCHCPKPEPTDRPSPGTERQDLDQTGPPVIVPPI
PLQLQPHCCHQGHGHPPAPVVGGCLLDGPSVHFHQSLDLQDDRSIHIHYGQSPAYCCTPP
ELHPALLPVPLILDSAGIEEWPCCGGAHVVWQRQVQQAHSEPQLMGPGTSMDRPPCRFHQ
GPSAERNTDICLYCQSIHHNQGSEEESGV
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtccctctgcggcgcctcgccgggctctggccgtggctgctcatggcggccctg
caggtggtgctgggccagccgagcatggaatcgggactccgagcggtcatcaacgtgact
ctggtgaaggatcccacggggaagccaatcgttctgaaaggggagttcgtgggaggaagt
gcaggcaatgcgcaagggaagctgaagcagtatcaccctgtgtctctatgcaacacaagc
gaggatgaacgacaagacagcggcttcatcaccatcgtcaagctggagcaattaggtccc
cactgctcgccgctgctggataaggctcgcatagcgttggaaaggggagcccaagctgtt
atcttcgacgtcagcgacgttgccatcgcagatgccgagctgaagaacacagactccctc
ccccatccagtggtgctgattaagggagcggacgctaagaagctgatgaatctggtcaac
cacaatgaggaggccacagttgttattgaggccaaggtggagcccaaatggccgcattat
gatgtgagcatcctgcttaccatcgtcctggttatcctcaccatcgtgctgatctttgct
ttccgctacaagtgcaagtccaacagaacttgggactccgtccatcagcagacagtgcgg
gccatcagtcggctggagaccagaatctaccgctcccagacctgctccggctcacagcgc
caccgtggggcgtggggctcggccaccagctctaactcgagccccgtatgcgccatttgc
ctggaggagtttcaggacggccagaatgtgaggatcatctcttgtgctcatgagttccac
agagactgtgtggatccctggctgatgcagcaccgcacctgtcctctctgcatgcacaac
atcatgggaacggagcgtcagcctcagagaaacagaaaccagcagagttcagagcagagc
cagagcttcttgcacccgcagcagtacagcaaccctcacagccacccgttcccccagcac
gccatccccttctccatgaggccccactacccccgtggtccctctggaccctaccccaac
ctgggccactacagcggctcgtctcctatggacgctcagaccctccacttcctcagcagt
cggcagctgggtgccggctgcgggttccacctcccaatggacgttccggggcgaccccac
aggctcggaaccggctgtcggacctctgcccatcactatgcatcccgccgctcctgccac
acttaccgctcctcctgtcaggcccagcggaacgcatccggctccaggctgcagcatggt
gcctcggcagcggcgcagagtcgtggcatggcgggcaacggccggcaggacgatgggagt
tgctctggaggcagctaccacacggagcgcagcgggtacctggcggacgggccggccagt
gactccagctcggggccttggcacggttcctccagtgactctgtcctgaactgcacggac
gtgtccctgcaaggtgtttatggcagctggtccaccttccgcagctctctgagcagtgac
tacgatccgttcgggtatttcgggacggggccggcggccggagtggggagtgggcacgtc
ccacgcaggaacagtctggaggccacggcccagaaccggcctaagtctctggattctgtt
gtgaacaaagcaggctgcctggaggagcagccgcagactgttttcagccacatccactac
caccgccacagacatcaccactatgaggagggggagcacggccagcggccgagcaggtgc
tcagatgaggagcaaggggccgccgcctctgctccgggtcaggacaaagactccccgccg
tgccctccaaaacacagcccctgccactgccccaagccagagcccaccgaccgacccagc
ccggggacggagcggcaggacctcgaccaaacgggaccgccagtcattgttcccccgatc
cccctgcagctgcagccccactgttgccaccagggccacggacacccccccgctcctgta
gtggggggctgtctacttgacggaccctccgttcactttcaccagagcctggacctgcag
gacgaccgcagcatccacatccactacggccagagcccggcctactgctgcacgccgccc
gaactgcacccggccctgctccccgtgcccctcatcttggactcggcggggatagaggag
tggccgtgctgtgggggggcccacgttgtctggcagagacaggtgcagcaggctcactca
gagcctcagcttatggggcccgggacctcaatggacaggcccccctgcaggttccaccag
gggccctctgctgagcgcaacacagacatttgtttatattgccaatcgatacaccataat
cagggatcagaagaggagtctggggtgtaa
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