Xiphophorus couchianus (Monterrey platyfish): 114156116
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Entry
114156116 CDS
T05908
Name
(RefSeq) protein transport protein Sec23A
KO
K14006
protein transport protein SEC23
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
114156116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114156116
Membrane trafficking [BR:
xco04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
114156116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
114156116
NCBI-ProteinID:
XP_027892156
LinkDB
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Position
13:complement(1312225..1327834)
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AA seq
764 aa
AA seq
DB search
MATFAEYIAQNEERDGVRFSWNVWPSSRLEATRMVVPVAALFTPLRERSDLPPIQYEPVL
CSRATCRAVLNPLCQVDYRAKLWACNFCYQRNQFPPSYAGISEVNQPAELLPHFSTIEYV
VQRGPQIPLVFLYVVDTCMEDEDLQALKESLQMSLSLLPPTALVGLITFGRMVQIHELGC
EGISKSYVFRGTKDLNAKQLQDMLGLTKPSAAQGRGPQTSQQPLSNRFLQPVQKIDMNLT
DLLGELQRDPWPVTQGKRPLRSLGVAMSIAVGLLECTFPNTGARIMTFIGGPGTQGPGMV
VGDELKTPIRSWHDIEKDNAKFMKKATKHFEALANRASTNGHIIDIYACALDQTGLLEMK
CCPNYTGGYMVMADSFNTSLFKQTFQRVFTKDVQGSFKMAFSATLEVKTSREVKVCGAIG
PCVSLSAKGPSVSENEIGTGGTCQWKICGLDASTTLALYFEVVNQHNAPIPQGGRGAIQF
VTQYQHSSGQRRIRVTTTARNWADAQTQIQSIAASFDQEAAAILMARLAVYRAETEEGPD
VLRWLDRQLIRLCQKFGDYHKDDPNSFRFSETFSLYPQFMFHLRRSPFLQVFNNSPDESS
YYRHHFNRQDLTQALIMIQPVLYAYSFNGPPEPVLLDSSSILPDRILLMDTFFQIVIYHG
ETVSQWRKAGYQDMPEYENFKHLLQAPVDDAQELLHTRFPMPRYIDTEHGGSQARFLLSK
VNPSQTHNNMYAWGQESGAPILTDDVSLQVFMDHLKKLAVSSAA
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggccaccttcgccgagtacatcgctcagaacgaggagcgcgacggcgtccgcttcagt
tggaacgtctggccctccagccgcctggaggcgacccgcatggtggtgccggtggccgct
ctgttcacgccactgcgggagagaagcgacctgcccccaatccagtacgaacccgtcctg
tgcagccgtgccacctgccgtgcggtcctcaacccactctgccaagtggactacagagcc
aagctgtgggcgtgtaacttctgctaccagaggaaccagtttcctccatcctacgccggc
atctcggaggtgaaccagcccgctgagctgctgcctcacttctccaccatcgagtatgtt
gtgcagcggggccctcagattccgcttgtcttcctgtacgtggtggacacctgcatggag
gacgaggacttgcaggctctgaaagagtccctgcagatgtccctgtctctgctgcccccc
accgctctggtgggactaatcacctttggacgcatggttcagatccacgagctgggctgt
gaggggatctccaagagttacgtcttcaggggcacaaaggacctgaacgctaagcagctg
caggacatgctcgggctaacaaagccctctgcggctcagggtcgagggcctcagacctcc
cagcagcctctgtccaacaggttcctgcaaccagtgcagaagattgacatgaacctgact
gacctgttgggggagctgcagcgcgacccctggcccgtcactcaggggaaaaggccgctg
cgctcgctgggtgtcgccatgtctattgctgtggggcttctggagtgcactttccctaac
accggcgcccggatcatgacgttcatcgggggcccgggcacacagggaccagggatggtg
gtcggggacgagctgaagacccccatcaggtcctggcatgacatcgagaaggacaatgcc
aagttcatgaagaaagccaccaagcatttcgaggcgcttgctaacagagcttccactaat
ggccacatcatcgacatatacgcctgcgctcttgatcagacgggtttgctggagatgaaa
tgctgccccaactacacaggaggatacatggtgatggccgactccttcaacacgtctctg
ttcaaacaaaccttccagagggttttcaccaaagatgtccagggatctttcaaaatggcg
ttttctgccacacttgaggtcaagacatccagagaggtcaaagtgtgtggagcgatcggc
ccctgtgtgtctctgagcgcaaaaggaccctctgtgtctgaaaacgagatcgggacggga
ggaacctgccagtggaagatctgcggtctggatgccagcacaacgctggctctttacttc
gaggtcgtgaaccagcacaatgctccaatccctcaaggtggccggggagccatccagttc
gtcacgcagtaccagcactcctcagggcaaaggcgcatccgagtcaccacaactgcaaga
aactgggctgatgctcagactcagatccagagcatagcggcatcgttcgaccaggaggcg
gcagccatcttgatggccaggttggcggtttaccgggcagaaacggaggagggacctgat
gtgcttcgatggttggatagacagctgatcagactgtgtcagaagtttggtgactatcac
aaggacgaccccaactcctttagattttctgagacgttctccctctatcctcagttcatg
ttccatctgcggcgctccccgttcctgcaggtgttcaacaacagtcctgatgagagttcc
tattaccgacaccatttcaacaggcaggacctgacccaggccctcatcatgatccagcct
gtgctgtacgcctactcctttaacggcccacctgagccggtgctcttggacagcagcagc
atcctgccggaccgaattctgctgatggacaccttcttccagatcgtcatctaccacgga
gagactgtgtctcagtggaggaaggctggctaccaggacatgcctgagtacgaaaacttt
aagcacctcctccaggctccagtggacgacgctcaagagctgctgcacactcgcttcccc
atgccgagatacatcgacacggagcacggcggcagccaggctcgtttcctgctctccaag
gtcaacccttctcaaactcacaacaacatgtacgcctggggacaggagtccggggctccc
atccttaccgacgacgtcagcctgcaggtgttcatggaccacctgaagaagctggccgtc
tccagcgccgcctga
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