Xiphophorus couchianus (Monterrey platyfish): 114156158
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Entry
114156158 CDS
T05908
Name
(RefSeq) tripartite motif-containing protein 46-like isoform X1
KO
K12022
tripartite motif-containing protein 46
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114156158
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
114156158
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
COS
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_3
SPRY
fn3
zf-RING_5
zf-RING_6
IBR
Flagellar_rod
GSH_synth_ATP
Motif
Other DBs
NCBI-GeneID:
114156158
NCBI-ProteinID:
XP_027892228
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Position
13:complement(16255283..16279952)
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AA seq
814 aa
AA seq
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MMKAGGSYFLHVAEMDVKTASSAMEALARISSNMKSLEHELHCPVCKEIVKQPVVLPCQH
SVCLMCASEVLVANGYPPPELPPEPNSPASTPNTRSPRQARRPTPKHEQRPIDRVLRSGP
HPPSPSMPRSPGHGTYPGRRRKEGPPLVMMFPCVPCGRDVELSEKGLTDCLRNLTLERIV
ERYRHTVSLGSVAVMCQFCKPPQTLEATKGCADCRSNFCNECFKLYHPWGTPRAQHEHIQ
PTLNFRPKVLTCTEHDQEKLQFYCRSCQRLLCPLCKLRRIHTGHKILPVAQAYQALKEKI
TKEMNFILSSQDTVLAQITQLESAITQTEVNSVSAREQLAQSIRDLTAALAERHSSLTQA
LEAARQKRGEALSAQVAERRGLMEHAGLMAFTQELLRETDQPCFVQAARQTHNRLSKAIE
NLQHFTLAADPSFRHFQLDVSKELKLLTELNFIQAPLAPVIDTQRSLAYDQLFLCWRLPQ
ESAPAWHFSVEYRRRGVVPGGASRGGIRGGLAAARWGWQRLDEVSGTSAVIDRLEMDSVY
VLRVRGCNKAGYGEYSEEVYLHTPPAPVLNFYLDSRWGLHADRLVVSKEQRGARSVPGLS
LLQAADHALTSCHLTSDLLVGDVAITQGRHYWACSVEPGSYLVKVGVGLESKLQEWFHLP
QDMASPRYDPDSGHDSGAEDALDSAPPFCFLTMGMGKIYLPQHSYHHHNNHGGSNRDPLT
NNNVPSGLTYPLPPRLGVCLDFEKGRVTFYDAHSLRPLWEGHVDCSGPVCPAFCFIGGGA
LQLQELVANRNADQTPVRRVTIQPRVTNLNNNNN
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaagcagggggcagctattttcttcatgtggcagagatggatgtgaaaacagcc
tcatcagcgatggaagccttggctcggatcagctccaacatgaagagtctggagcacgag
ttgcattgtcctgtgtgtaaggagatcgtcaagcagcccgtggttctgccatgccagcac
agcgtctgcttgatgtgtgcctcagaggtcctggtggccaatggctacccacccccagag
ctccccccggagcccaactctccggcctccacgcccaacactcgctctcctcgtcaagca
cgccggcccactcccaaacacgagcagcggcccattgaccgagtgctgcgatcaggcccc
catccgccttcaccatccatgcctcgctctcccggacacgggacgtatccagggcgacgg
cgtaaggagggccctcctctagtgatgatgttcccctgcgtcccctgcggccgggatgtt
gagctgagcgagaagggcctgactgactgtctccgcaacctcacattggagcgcattgtg
gagaggtacagacacacagtgagcctggggagtgttgctgtgatgtgccagttctgtaag
cctcctcaaactctggaggccaccaagggctgtgctgactgccggtcaaatttctgcaac
gagtgtttcaagctctatcacccatggggaacgccccgagcacaacacgaacacatccaa
ccgacactcaatttcagaccaaaggttctgacctgcacggagcacgaccaggagaagctg
cagttttactgcaggtcctgccagcggctgctctgcccgctctgcaaactgcggcggatc
cacactggacacaaaatcctcccggtggcacaagcttaccaagctcttaaggagaagata
actaaagagatgaacttcatcctgtccagccaggacacagtcctggctcagatcacccag
ctggagagcgccatcactcagactgaggtgaacagcgtgtcggccagagagcagctggcc
cagagcatcagggacctgacggccgctctcgccgagcgtcactcctcgctcacccaggcc
ctggaggcggcgcggcagaaacgcggcgaggcgttgtctgctcaggtggcggagagacgc
ggcttgatggaacatgcggggctcatggctttcacccaggagctgctgagagagacagac
cagccctgcttcgtgcaggccgctcgccaaacacacaacaggttgagcaaagcaattgag
aatctccagcatttcactttggctgctgatccgtccttcagacacttccagctggatgtt
tccaaagagctcaaactcctgacagagcttaacttcatccaagctcctctggctcctgtt
atcgacacccagcgctctctggcgtacgaccagctcttcctgtgctggcggctgcctcag
gagtcggcgcccgcctggcatttttccgtggagtatcgccgccgaggcgtggtgcccgga
ggagcttcaaggggtgggatcagaggaggcctcgctgccgccagatggggctggcagcgg
ctggacgaagtgagcggaaccagcgccgtgatcgacaggctggagatggacagcgtgtac
gtcctgcgcgtgaggggctgcaacaaggcgggttatggggagtacagcgaggaggtgtac
ctgcacaccccacctgcaccagtgcttaatttctaccttgactctcgttggggtctccat
gctgaccgactggtggtcagcaaagagcagcgtggggctcgaagcgtccccggtctctcc
ctgctgcaggccgccgaccacgccctcacctcttgccacctcacgtcggacctcctggtg
ggggatgttgccattacacaaggaagacactactgggcatgctcagtggagcctggatcc
taccttgtaaaggttggagtcgggttggagtccaaactgcaggagtggtttcacctccca
caggacatggccagtcctcgctacgacccagacagcggccatgacagtggagcagaggat
gccctggactctgcgccgcccttctgcttcctcaccatgggcatgggtaagatatacctg
ccccagcacagttaccaccaccacaacaaccacgggggcagcaatcgagacccactcacc
aacaacaacgtcccctcgggcctcacctacccgctgcctcctcgactcggcgtgtgcctt
gactttgagaaagggcgtgtcaccttctacgacgcccactccctgcggcccctgtgggag
ggtcacgtcgactgctccggccctgtctgccctgctttctgcttcatcggcggaggcgcc
ctgcagctgcaggagctggtggccaatcgcaatgcagaccagacgccggtcaggagggtg
accatccaaccccgcgtcaccaatttaaacaacaacaacaactga
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