Xiphophorus couchianus (Monterrey platyfish): 114156358
Help
Entry
114156358 CDS
T05908
Gene name
atf6b
Definition
(RefSeq) cyclic AMP-dependent transcription factor ATF-6 beta isoform X1
KO
K09049
cyclic AMP-dependent transcription factor ATF-6 beta
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04141
Protein processing in endoplasmic reticulum
xco04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
114156358 (atf6b)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
114156358 (atf6b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114156358 (atf6b)
Transcription factors [BR:
xco03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
CREB
114156358 (atf6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
YabA
bZIP_Maf
MCU
CENP-H
PBP_sp32
Motif
Other DBs
NCBI-GeneID:
114156358
NCBI-ProteinID:
XP_027892536
LinkDB
All DBs
Position
13
AA seq
716 aa
AA seq
DB search
MTADLLSDLDSRFFADNLLTSEDWDACLFKCESMEEGEDGDFSQGLKYEPSFDNDLVLTL
DPDNRTSPWRYLDDNLLTGNTLVKKNEMTLTEPLPVEMLFQVKAEPPSPASSLDSDCSTL
SPDPQVTIKAENPPTPPYMYGDVLSPPLGTMEVTVATTAVPPPQSQIPIMTQTQLQTPLT
SVQAVINGIPTQTAAVLPSTLKASTILSTKPPIQPRPVCVAATLPVPQNPAPAKTLILQG
LPSMDQNRPVVLSPSVCLSSAPAIVKMEPVSPTIPQHCSSPAASSTSKPIVPATTPLPSN
NSNDIDMKVLKRQQRMIKNRESACQSRKKKKEYLQNLEAQLREAQQENERLRRENQALRE
RLAVKESGDSASNKRAVCVMAVLLFMTFSFGPVSITDRKLSASLQEDLVSYTGRRLLEIE
QQQDRQADPQPLQKIEDKPEKPESGGDERWKGGEAERYAPESYQFRNLSDMFSDLKDLVL
PDIERYFTSSDCRQFNRSESLRLADELRGWVHRHQIDRKKSGGKAKTAKKAKITQKAQLR
KANISRYLPIQAHRSIESQLRVLPGPEVTYSDFLDAIDRREDTFYVVSFRRDHLLLPAIS
HNKTSRPKMSLVMPAMSVNESLYNSSQGYEMMMQVDCEVMDTRIIPIKSSAVPPSLREPS
PPPPSSQHGAHHHHGNSTSLRGRHQHHPSSSSPSPRQPLPARTQTPEYLISQSEGV
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgactgcggatttactgtctgatctggacagccgattcttcgctgataaccttttgacg
agcgaagattgggatgcctgcctgttcaagtgtgagagcatggaggaaggagaggacggg
gacttcagtcaagggttgaaatacgaaccatcgtttgacaatgacctcgtgctcaccctc
gatcctgataaccgcacgtcaccatggcgataccttgacgacaaccttctcacaggaaac
actttggtgaaaaaaaatgagatgacattgacagagccgctccctgtggaaatgttgttc
caggtcaaggctgagcctccctctcctgcttcctcgctggactcagattgttcgaccttg
tcgcctgacccacaggttacaattaaagccgaaaaccctccgactcctccgtacatgtat
ggagacgtactgtctcctccgctggggacgatggaggtaaccgtggcaacgacagcagta
cccccaccccagtcccagattccaataatgacacagactcagctgcagacaccattaaca
tctgtccaagcagtcatcaatggaataccgacacaaactgcagcagtcctgccaagcaca
ttaaaagccagcaccatcctgagcaccaaacctcccatccagccccgacccgtgtgtgtt
gctgctacactccccgtcccgcaaaaccctgcaccagcgaagaccctcattctgcagggg
ctcccctccatggatcagaacagacccgttgtcctctctccgtccgtctgtctcagttcg
gctccggctattgtcaaaatggagcccgtgtcccctaccatccctcagcactgctccagc
ccagctgcctcctcaaccagcaagcccatcgtcccggcgaccacgccgttacccagcaac
aactccaacgacattgatatgaaggtgctaaagcggcaacagaggatgataaaaaacaga
gagtctgcctgccagtcaagaaagaaaaagaaggaatacctgcagaacctggaggctcag
ctgagggaagctcagcaggagaacgaacgactccgcagggagaaccaggcgctgagggag
agactggctgtgaaggagagcggcgactctgcaagcaacaagagagcagtgtgtgtcatg
gcggttctgctgttcatgactttcagctttggccccgtcagcatcactgacaggaagctg
tcagctagtctgcaggaagatctggtgtcttatacgggtcgccggctgctggagatcgaa
cagcagcaggatcgccaggctgatcctcaacctctccagaaaattgaggacaaaccggag
aaaccggagtccggcggcgatgagcggtggaagggaggagaggcggagagatacgctcca
gagtcttatcagttccgaaacctgagtgacatgttcagtgacttgaaggatctggttctg
ccagacatcgaacgttacttcacttcctcagactgccgacagttcaaccgctctgagtct
ctcaggctcgcagatgagctaagaggatgggttcatcgacatcaaatcgacaggaagaag
tctggaggaaaagcaaagacggccaaaaaagcaaagatcacccagaaagctcaactgagg
aaggcaaacatttccagatatctgccaatccaggctcaccgctccatagaaagtcagctg
agggtacttcctggtcctgaggtcacctacagcgacttcctggacgccatcgaccgtagg
gaagacacgttctacgtcgtgtctttcaggagggaccacctgttactgcctgccatcagc
cataacaaaaccagccggcctaaaatgtctctggtgatgccagccatgtctgttaacgag
agtctctacaactcgtctcagggctacgagatgatgatgcaggtcgactgcgaggtcatg
gacactcgcatcatccccataaagtcctctgccgtccctccatctcttcgtgaaccctcc
cctcctccaccctcctcccagcatggtgcccaccatcaccatggcaacagcacctccctc
agaggacgccaccagcaccatccatcgtcttcatccccttctccaaggcagcctctacct
gcccgaactcaaacacccgaatacttgatcagccaatcagaaggagtctga
DBGET
integrated database retrieval system
