Xiphophorus couchianus (Monterrey platyfish): 114162009
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Entry
114162009 CDS
T05908
Symbol
pdgfd
Name
(RefSeq) platelet-derived growth factor D
KO
K05450
platelet derived growth factor C/D
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04010
MAPK signaling pathway
xco04020
Calcium signaling pathway
xco04510
Focal adhesion
xco04540
Gap junction
xco04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
114162009 (pdgfd)
04020 Calcium signaling pathway
114162009 (pdgfd)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114162009 (pdgfd)
04540 Gap junction
114162009 (pdgfd)
09142 Cell motility
04810 Regulation of actin cytoskeleton
114162009 (pdgfd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
xco04052
]
114162009 (pdgfd)
Cytokines and neuropeptides [BR:
xco04052
]
Cytokines
Growth factors (RTK binding)
114162009 (pdgfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
TT_ORF2
Motif
Other DBs
NCBI-GeneID:
114162009
NCBI-ProteinID:
XP_027901552
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All DBs
Position
18:complement(17885818..17951374)
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AA seq
365 aa
AA seq
DB search
MNGAMVFQMWIILLLATLSKVGKAQVANAKVLRGNSRRDDLYHKDENITVTPAGGVIFSP
NYPKAYPRNLCLSWKLLAPPGSLIHLQFDEQFHLEEPVNGKCSYDFVEVEEKSQTSIIKW
GRWCGQKAPSSLTSKSNTLRIIFNSDDYFVAKPGFKIYYSLLLSWVSCHSWIDVTELMSD
MSANEMPATEAPQTLEDLDRTIAAFDTVEQLLQSLSPDTWRQDLDNIYTQTYIYYRSKSY
HLASRQNKVDLNRLHDDVKRYSCTPRNYSVNLREELKTTNAVFFPRCLLVKRCGGNCGCG
TNNWNTGCTCQPSKTTTKLHEVLKYAPETTPYQYQQRQRVRWVIDEIFLSHHEMCECACP
LQPPR
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagcgatggttttccagatgtggatcattttattgttggccactttaagcaaa
gttgggaaggctcaggtcgccaatgccaaagtgttgaggggcaacagcagaagagacgac
ttgtaccacaaggacgaaaacatcacggtgactccagcgggtggcgtcatcttcagccca
aactaccccaaagcttatccccgcaacctgtgtctgtcatggaaactgctagcaccacct
gggagcctcatccaccttcagtttgatgaacagttccacctggaggagcctgtgaatgga
aagtgcagttatgactttgttgaagtggaggaaaaatcacagaccagcattataaagtgg
ggtcgttggtgtgggcagaaggcaccctccagtctgacttcaaaatccaacacactcaga
atcatcttcaattcggacgattactttgtggcgaagccaggattcaaaatctactactca
ctgctgctaagttgggtgtcatgtcattcctggatagatgtcactgaactcatgtcggac
atgagtgcaaacgagatgccagccacagaggctcctcagacactggaggacttggataga
accatagctgcctttgacactgtagagcagcttcttcagtctttgagtccagatacttgg
agacaagatctggacaatatctacactcaaacatacatatattatagatccaagtcctat
catctggcaagccgacagaataaagttgatctgaatcgtctccatgacgatgtcaagcgg
tatagctgcacacctcggaactactctgtgaaccttcgggaggagctgaagaccaccaac
gctgtcttcttccctcgatgtctgctggtgaaacgctgcggaggcaactgtggctgcggg
accaataactggaacaccggctgtacctgtcagccctcgaaaaccactacaaaactacac
gaggtgctgaagtatgccccagagaccactccgtaccagtaccagcagaggcagcgggtg
cgctgggttattgatgaaattttcctctcgcatcatgaaatgtgcgaatgtgcgtgtccg
ctgcagcctcctcgctga
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