Xanthomonas campestris pv. raphani: XCR_0948
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Entry
XCR_0948 CDS
T01872
Name
(GenBank) TonB-dependent outer membrane receptor
KO
K16087
hemoglobin/transferrin/lactoferrin receptor protein
Organism
xcp
Xanthomonas campestris pv. raphani
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xcp02000
]
XCR_0948
Transporters [BR:
xcp02000
]
Other transporters
Pores ion channels [TC:
1
]
XCR_0948
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AEL05865
UniProt:
G0CDG2
LinkDB
All DBs
Position
992046..994277
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AA seq
743 aa
AA seq
DB search
MIRLHPLVVALSLALPVVPLCAIAAEADAGAAAARDVHDFDRLQVTATRTQRALVEVPGT
VDVIDREQLDNQLVRELKDLFRYTPGVSVTSTSGRFTGASGVRIRGLDGNRVAILVDNVP
VSDTFNFGSYLNANRNFVDLETLKRVEVVRGPASSLYGSDALGGVVAFVTKDPSDYLSAD
KHSYVGLKFGYEGDWNGLFAGATGAFGGERWSGMVAVSHRQGQEAQNQGDNRARNYTRTA
PNPQQVDGRSVLGKLVYAPNAQQRFKLTVEGNEDDGRIEALSGIDARSPSASQRILSQDG
RDHQTRARVSLRHELDALDTALADDLFWQLYRQDSASLQRTDELRGNNTRRHNEHHFDQR
VYGLLVNAHKAIDTGTLRHDITYGLEGSWTDTREKRDGYSLNLANGAVSKLVGQDLFPVR
DFPMSETTKLGVYAQDEMRLLDGRLSLIPGVRVDYFRLSPRVDDIFRQDNPGVAAETIDE
QQVSPKFGAVWRFSDAWSAYANYAHGFRAPPYNDVNIGFTNLQARYTAIANPDLKSETSR
GGELGLRFNDTVGYLGVSVYYTDYRNFIESYAPAGVNAEGLLLFQSRNVDDVVIKGAEAR
AGVDLGALAGWQGWSVNSAVAYSQGDNLTDDTPLNSVDPSRGTLGVAFDSERWGAEVIGT
FVARKRRPQLASYYTPAGYATLDLMGHWEFAPGAKVTGGIFNLADRRYVDWNALPNGTLD
SSTVLDRFTGAGRTASVSLAVSW
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcctgcatccgctggtggttgcgctgtcactggcgctgcccgttgttcccctg
tgcgccattgctgccgaagccgatgccggcgctgccgcggcgcgcgacgtgcatgacttc
gaccgtctgcaggtcaccgccacgcgcacccagcgcgccttggtggaggtgccgggcacc
gtggatgtgatcgaccgcgagcagctggacaaccagttggtgcgcgagctcaaggatctg
ttccgttacacgcctggcgtgtcggtcaccagcaccagcgggcgcttcaccggtgccagc
ggcgtgcgcatccgcggtctggatggcaaccgcgtggcgatcctggtcgacaacgtgccg
gtgtcggacaccttcaatttcggcagttatctcaacgccaaccgcaatttcgtggacctg
gaaacgctcaagcgggtcgaggtggtgcgtggcccggccagttcgctgtatggctccgat
gcactgggcggtgtggtggcgttcgtgaccaaggatccgtcggattatctcagcgccgac
aagcacagctatgtgggattgaagttcggctacgaaggcgactggaacggcctgttcgcc
ggcgccaccggcgcgttcggtggcgagcgctggagcggcatggtcgcggtgagccatcgc
cagggccaggaagcgcagaaccagggcgataaccgcgcccgcaactacacccgcaccgca
cccaatccgcagcaggtcgatggccgcagcgtgctgggcaagctggtgtatgcgcccaac
gcgcagcagcgcttcaagctcaccgtggagggcaatgaggacgacggccgcatcgaggcg
ttgagcggtatcgatgcgcgcagccccagcgcatcgcaacgcatcctgtcgcaggacggc
cgcgaccatcagacccgcgcgcgggtgtcgctgcgccacgaactggatgcgctggatacc
gcgctcgccgacgacctgttctggcagctctaccgccaggacagcgcaagcctgcagcgc
accgacgagttgcgcggcaacaacacgcgccggcacaacgaacatcacttcgaccaacgc
gtctacggcctgctggtcaatgcgcacaaggcgatcgacaccggcacgctgcggcacgac
atcacctacgggctggaaggctcctggaccgacacccgcgagaagcgcgatgggtattcg
ctcaacctggccaacggtgcggtgagcaagctggtggggcaggacctgttcccggtgcgc
gatttcccgatgagcgagaccaccaagctgggcgtgtacgcgcaggacgaaatgcggctg
ctggacgggcggttgtcgctgattcccggcgtgcgcgtggattatttccggctgtcgccg
cgcgtggatgacatcttccgccaggacaatccgggcgtagccgccgaaaccatcgacgag
cagcaggtgtcgcccaagttcggcgcggtgtggcggttttcggatgcgtggtcggcgtat
gccaactatgcgcacgggttccgcgcgccgccgtacaacgacgtcaatatcggcttcacc
aatctgcaggcgcgctacaccgccatcgccaatccggacctgaaatcggaaaccagccgc
ggcggcgaactgggcctgcgtttcaatgacaccgtcggctacctcggggtcagcgtgtat
tacaccgattaccgcaacttcatcgaatcgtatgcgccggccggcgtcaacgccgaagga
ttgctgctgttccagtcgcgcaacgtggacgatgtggtgatcaagggtgccgaggcgcgt
gccggtgtcgacctgggcgctctggccggctggcagggctggtcggtcaatagcgcggtg
gcgtattcgcaaggcgataaccttaccgacgacacgccgctcaattcggttgacccatcg
cgcggcacgctgggcgtggcgttcgacagcgagcgctggggtgcggaagtgatcggcacg
ttcgtggcgcgcaagcgccgcccgcaactggccagctattacacgcctgccggttacgcc
acgctggacctgatgggccactgggaattcgcaccgggtgccaaggtcaccggcggcatc
ttcaatcttgccgatcgccgctatgtcgactggaacgcgctgcccaacggcacgctggac
agcagcacggtgctcgatcgcttcaccggcgccgggcgtaccgcctcggtcagcctcgcc
gtgagctggtag
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