Xanthomonas citri pv. citri MN11: J163_02691
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Entry
J163_02691 CDS
T03780
Name
(GenBank) RHS repeat-associated core domain
Organism
xcr
Xanthomonas citri pv. citri MN11
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF4329
DUF6531
RHS
Motif
Other DBs
NCBI-ProteinID:
AJZ00389
UniProt:
A0A8I0HBN9
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All DBs
Position
2950330..2955108
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AA seq
1592 aa
AA seq
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MDKVSQGNNSALHWCLAKLPIVMARVVVCSIAYIASVPIEPVRAQALPPAEFCISGGCYP
TQVEALAALAASTRYAGVGQYLQHTFTSVTNPLTGQLSLRYDVLDRPAKQIADPIYTVDM
GVHGQGNPGCAAPQDPNYSTYCTNEGELISAALAHLRTRIKSGCSLDLGKTTRDYNTTNL
GLSGNAIRYGQKDFSSETTCTASNGAVTKGKLNWSIYKRRLISCESGLSPNFGGGWTDSE
LPQALMCGSSADFSFMSARASQVSSCSTANPCHPTTGDKTRTETDFMFAGKPFSRYYHSL
AQFHDRDNPFALGWSHSYSDYLVSTDTYSPVLIDAQGNYENFVKVDGNIYRGANSNRIMI
YLNTPEAQYRLFEASGETRDFNRDGALLSVRNAATPSNDVTLSYIEEQLTSATDASGRKI
QFNYALDRLRSITLPDGSLISYEYDRDSNLTAADYGDGSVKRYHYHEQGLADPKLIHHLT
GITSEDGRRYGTFNYEPYGRIIGSALESGSEQVDAVSLSYDSSTTTSVTYALGEKKIFSA
GSGLYRSLENLASEAGSDKNTYLADGRLQSKTDRAGTVTKYEYQPTYLSAIVKAAGTAQQ
QREEFVRDVAKNALLEHRIYDPKGKLRQSTVLTYNGRGQQIARTQTDAVTGVVRTLRNEY
CEQAALDAGGCPILGLITMSDGARTDVPDTTAYTYYGSDDSSCAGAPTTCPHRKGDLWKA
TNALGQVTEYLAYDGAGRPLSIKDANGNITDYSYHRRGWLTATKVHGTDAASDLDDRITR
IDYWPTGLIKQVTQPDGAFAAFTYDGAHRLTDIADNAGNTLHYTLDNAGNRIKEDTRDVA
GMLKRTLSRVYNQLGQLKTQATAASDPTDFAYDAKGNTVAVNDALGTAALGDYDPLNRLS
RTLQDANGIKAETKFAYDYQGKLAKVTDPKGLGTTYEYNGFGDLTKLASPDTGVTAYTYD
SAGNRANQTDARGVITTYGYDALNRLTKLTYPKPTDGLDINYTYDIVPTVCAPGEAFLIG
RLARMSDGSGTTEYCYNAFGDVTRKVQTSNGKTLVLRYDYTVGGQLRRMTYPDGAVVDYL
RNAQGQTTEVGVTPAGGGRQVLLGNASYYPFGPAAGWTYGNGRSLARQYDLDYRPQAIQD
TRPGGLEVGFGFDPVGNLTALTPAGNPTPEIGLGYDTLGRLTALTDGVTGTVIDGYSYDA
TGNRLSAKVGSVTQAYTYPATNHRLSAVANVARTYDKTGNTLTIGGKAREFSYDASGRMS
MAKRAGALVMNYRYNGRGEQVRRFLGTTNAYTLYDEAGHWLGDYDSNGAPKQQAIWLDDL
PVGLLANANALHYIEPDHLGSPRMVIDPTRDVAVWTWSLKGEAFGNTAPNQDPDGDGAAL
VLDMRFPGQRFDAASGLNQNYFRDYDTATGRYGQSDPIGFNGGIGTYVYSLSSPFRWSDK
FGLLPGDCYRTENLAAAQALKDILPASIREDLEYGGWVYQKPNGYYSYTAPQRGLTSSVN
PGPRPDGATGAYHTHGDVTPGYLGEAFSKADTRIPYGDAAYLGTPSGKLLRFSTSGSPYS
DLPDAISSSGCGCDGNNNKLLEFLSNAFGWQL
NT seq
4779 nt
NT seq
+upstream
nt +downstream
nt
atggataaggtttcccagggaaacaattccgcattgcactggtgtcttgccaagctgccc
atcgtcatggcgagagtggtagtctgttcgatcgcctatattgcatcagttccaatcgag
ccagttcgcgcgcaggcgttgccacccgccgaattctgcatctcgggaggatgctatccg
actcaggtggaggcactggcagcgttggcggccagcacgcgatacgccggcgtcggacag
tatctccaacacacattcacatctgtgaccaatccgcttacggggcagctttcgctccgt
tacgacgttttggaccgtccagcgaaacaaattgccgatccgatctatacggttgacatg
ggtgtccatggccaaggcaatcctggctgtgccgcgccgcaggatccaaattattcgaca
tattgcacgaacgagggtgagctgattagcgctgcgttagcgcatcttcgtactcgcatc
aaaagtggatgcagcctcgacctcggaaaaacaacccgcgactacaacaccaccaacctc
ggcttgagcggaaatgccatccgctacggtcaaaaagacttcagcagcgagaccacctgc
accgcatctaacggcgcggtgacgaagggaaagctcaattggtcgatctacaagcgacgc
ctgatttcgtgtgagtctggactttcccccaacttcggcggcggctggaccgatagcgag
cttccgcaggcgctgatgtgcggatctagcgcggatttctcgttcatgtccgccagagcg
agccaggtctcgagttgctccaccgcaaacccctgtcaccccaccactggcgacaaaacg
cggaccgaaaccgacttcatgttcgcggggaaacccttttccaggtactaccactcactc
gctcaattccacgatcgcgacaatccttttgcgcttggctggtcgcatagctacagcgac
tatctggtctcaaccgacacgtactctcccgtcttgatagatgcgcaggggaactacgaa
aacttcgtcaaagtggacggaaacatttatcgaggagcaaactcgaatcgcattatgatt
tatctaaatacgccagaggcgcagtatcggctcttcgaggcttctggtgagactcgggac
ttcaaccgcgacggtgcgctgctatccgtacgaaatgcagcaaccccctctaatgacgtc
acactctcttacatcgaagaacaattgacttcggcgaccgatgcgtccggcagaaagatc
caattcaactacgcacttgatcgccttcggtcgatcacacttcccgatggcagcctgatc
agttatgaatatgatcgcgactcaaatctcaccgcagcagattatggcgatgggagcgta
aagcgctatcactatcacgagcaaggtcttgccgaccctaaattgatacatcacctcacc
ggcataacatcggaagatgggcgtcgctatggcacgttcaattacgaaccctatggccgc
atcattggtagtgctttggagtcaggaagcgaacaggtggacgccgtctcgcttagctat
gatagctcgacgacaaccagcgtgacctatgcacttggcgaaaagaagatattcagtgca
ggatccggcctgtatcgatcgctggagaacctcgccagtgaagctggcagcgacaagaat
acttaccttgccgacggacgcttgcaatcgaaaaccgatcgcgcgggaaccgtcacgaag
tacgagtaccagccgacatatctatccgcaatcgtcaaggctgcggggaccgcacagcaa
caacgcgaggagttcgttcgcgatgttgccaaaaacgcactgctcgaacaccggatttac
gaccccaaaggcaagttacgccagtccaccgtccttacctacaatggacgtggtcagcaa
attgcccggacacaaacagacgctgtcaccggtgtagtgagaaccttacgcaatgaatac
tgcgaacaagcagctctcgatgcgggtggctgccctatcctggggctgatcacaatgtcc
gatggcgcccgcacagatgtaccggatacgactgcctacacctactacggaagcgacgat
agttcgtgcgctggagcgcccacaacttgcccgcatcgcaaaggcgatctttggaaagcc
accaatgcacttggacaggtgacagagtatctcgcctacgatggcgcaggccgtccgctt
tccatcaaggatgcaaacggtaacattaccgactacagctaccaccgtcgcggctggttg
acggcaaccaaagtgcacggaaccgatgcagcgagcgacttggacgaccgtatcacccgc
atcgactactggcccaccggcctgatcaagcaagtcacgcagcctgacggcgcattcgct
gcttttacgtatgacggtgcgcatcgcctgaccgatattgccgacaatgccggcaacacg
ctgcactacaccttggataacgccggaaaccgaatcaaagaagacactcgggatgtcgcc
ggaatgctgaaacgtacgttatcgcgcgtctacaatcagcttgggcaactcaagacccaa
gcgaccgctgcaagcgatccaaccgactttgcttatgatgcgaaaggcaacaccgtcgca
gtgaacgacgccctgggcaccgccgcgctgggcgattatgacccgctgaataggctctca
cgcacgttgcaggatgccaacggcatcaaggcagagactaagtttgcctatgactaccaa
ggtaaactagccaaggtcaccgatccgaaggggttgggcaccacgtacgagtacaatgga
ttcggcgacctgacaaaactggcaagtccagacaccggcgtaaccgcttacacttacgac
agcgctggcaaccgcgccaatcagactgatgcgcgtggggttatcacgacttacggctat
gacgcgctcaatcgcctgaccaagctgacctatccaaagccaaccgatggcctggatatc
aattacacctacgatatcgtgcccaccgtctgcgcgcctggcgaagcatttctcattggc
cgcctggctcgcatgagcgatggcagtgggaccaccgagtactgctacaacgcgtttggc
gatgtaacccgcaaagtgcagaccagcaacggcaagacattagtgctgcgctacgactac
accgtcggcggccagctgcggcgcatgacctatccggacggcgcggtggtcgattacctg
cgtaacgcgcaaggccagaccaccgaagtcggcgttaccccggctggaggcggccggcag
gtgctgctgggcaatgccagctactacccgttcggcccggccgccggctggacctacggc
aatggccgcagcctcgcccgccagtacgatctggattaccgcccgcaggccatccaggac
acccgcccaggtgggctggaagtgggcttcggcttcgacccggtgggcaatctcaccgcg
ctcaccccagcaggcaatcccacgccggagatcggcctgggctacgacacgctcggccgc
ctcacagccctcaccgacggtgtcaccggaaccgtcattgacggctatagctatgacgcc
accggcaatcgccttagcgccaaggttggcagcgttacacaggcttacacctatccagcg
accaatcatcgcctgagtgccgtagcaaacgtggcgcgaacttacgacaaaacgggaaat
acgctgacgatcggcggcaaagcgagggagttctcctacgacgcatccggtcgcatgagc
atggccaagcgtgcaggcgcgctggtgatgaactaccgctacaacggccgtggcgagcag
gtacgccgcttcttaggcaccaccaacgcctacacgctctacgatgaagctggccattgg
ctgggcgactatgacagcaacggcgcccccaagcagcaggcgatctggctggatgatcta
ccagtcggcctgctggccaacgccaacgcgctgcactacatcgaacccgatcacctgggc
agcccgcgcatggtgatcgacccaacccgcgatgtggcggtgtggacatggagcttgaag
ggcgaagcgttcggcaacaccgcgccgaatcaggatcctgatggagatggcgcggcgctg
gtattggatatgcgcttcccggggcagcggtttgacgcggcgagcgggttgaatcagaac
tacttccgggactacgacactgctaccggacggtatggacagagtgatccgattggattt
aacggaggtatcggcacttatgtttatagcctctcaagtccattccgttggtcggacaaa
tttggcctgcttccaggtgattgttacaggacagaaaatttggcagcagctcaggcgctt
aaggacatcctcccggcatcgataagagaagatttggaatacggcggctgggtatatcag
aaaccgaacgggtactatagttacacggcgccacaacgcggtctgacatcttcagtgaac
cctggcccgcggccagatggagcaactggcgcgtaccacacacacggagatgtaactccg
ggctatttgggagaagcgttctcaaaggctgacacaagaataccctatggggatgcggcc
tacttaggaactccctcgggcaagttattgagattttccacttcaggctcgccttacagt
gatctccctgacgcgatttcgagctccggctgtggatgtgacggcaacaacaataagctc
ctggaatttctcagcaatgcattcggatggcaattatga
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integrated database retrieval system
