Xanthomonas citri subsp. citri A306: J151_02562
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Entry
J151_02562 CDS
T03584
Name
(GenBank) DNA/RNA helicase, superfamily II
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
xct
Xanthomonas citri subsp. citri A306
Brite
KEGG Orthology (KO) [BR:
xct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xct03009
]
J151_02562
Enzymes [BR:
xct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
J151_02562
Ribosome biogenesis [BR:
xct03009
]
Prokaryotic type
rRNA helicases
J151_02562
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AJD68984
LinkDB
All DBs
Position
2784748..2786124
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AA seq
458 aa
AA seq
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MNEFSALPLSPALAPGIDALGYTVLTPIQAHSLPPILQGLDVIAQAPTGSGKTAAFGLGL
LQKLDPALTRAQALVLCPTRELADQVGKQLRKLATGIPNMKLVVLTGGMPLGPQLASLEA
HDPQVVVGTPGRIQELARKRALHLGGVRTLVLDEADRMLDMGFEEPIREIASRCDKHRQS
LLFSATFPDSIRTLARELLKEPVEITVEGADSAPEIDQQFFEVDPTYRQKAVAGLLLRFN
PESSVVFCNTRKEVDEVAGSLQEFGFSALALHGDMEQRDRDEVLVRFVNRSCNVLVASDV
AARGLDVEDLSAVVNYELPTDTETYRHRIGRTARAGKHGLALSLVAPRETARAQALETEQ
GQPLKWSRAPLATARPAQLPQAAMTTLRIDGGKTDKLRAGDILGALTGEAGLSGAAIGKI
AIYPTRSYVAIARAQVAKALAHLHAGKIKGRRFRVSKL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaattctccgcgctgccgctgtcgccggccctggcccccggcatcgacgccctt
ggctacaccgttttgactcccatccaggcgcatagcctgccgccgatcctgcaggggctc
gatgtcatcgcgcaggcgccgaccggcagcggcaagaccgccgcgttcggactgggcctg
ctgcaaaagctcgaccccgcgctcacccgcgcacaggcgctggtgctctgccccacccgc
gaattggccgaccaggtcggcaagcagctgcgtaagctcgccaccggtatccccaacatg
aagctggtggtgctcaccggcggcatgccgctcgggccgcagctggcctcgctggaagcg
cacgacccgcaagtggtggtgggtacgcccgggcgcatccaggagctggcccgcaaacgc
gccctgcacctgggcggcgtgcgcacgctggtgctggacgaggccgaccgcatgctcgac
atgggcttcgaagaacccatccgcgagatcgccagccgttgcgacaaacatcgtcagagc
ctgctgttttcggccacgtttccggacagcatccgcacgctcgcacgcgagctgttgaaa
gagcccgtcgagatcaccgtggaaggcgccgatagcgcaccggagatcgatcagcagttc
ttcgaggtcgacccgacctatcggcaaaaggccgtcgccggcctgctgctgcgcttcaat
cccgaatccagcgtggtgttctgcaatacccgcaaggaagtggacgaggtggcgggttcg
ctgcaggaattcggcttctctgcacttgccttgcatggcgacatggaacagcgcgaccgt
gacgaagtgctggtgcgcttcgtcaaccgcagctgcaacgtcctggtggccagcgacgtg
gccgcacgcgggctggacgtggaagacctttccgccgtggtcaactacgagctgcccacc
gataccgaaacctatcgccaccgcattggccgtaccgcacgcgccggcaagcacgggctg
gcgctgagcctggttgccccgcgcgaaaccgcccgcgcgcaggcattggaaaccgaacaa
ggccagccgttgaaatggtcgcgtgcaccgctggccactgcgcgtccggcgcaactgccg
caggcggcaatgaccaccttgcgcatcgacggcggcaagaccgacaagctgcgcgccggc
gacatcctgggcgccctgaccggcgaagccgggctctcgggcgcggcaatcggcaagatc
gccatctaccctacccgctcctacgtggccattgcccgcgcgcaggtcgccaaggcgctg
gcacacctgcacgcaggcaagatcaagggacgccggtttcgggtcagcaagctctga
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