Xanthomonas citri pv. citri MN10: J162_03558
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Entry
J162_03558 CDS
T03779
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
xcw
Xanthomonas citri pv. citri MN10
Pathway
xcw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
xcw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
J162_03558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xcw03021
]
J162_03558
03400 DNA repair and recombination proteins [BR:
xcw03400
]
J162_03558
Enzymes [BR:
xcw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
J162_03558
Transcription machinery [BR:
xcw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
J162_03558
DNA repair and recombination proteins [BR:
xcw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
J162_03558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
AJZ05668
UniProt:
A0A0U5FI06
LinkDB
All DBs
Position
complement(3978732..3979031)
Genome browser
AA seq
99 aa
AA seq
DB search
MARITVEDCLEVVNNRFELVMMASKRARQLANGVQPLIENADASDKPTVMALREIAARRI
DNALIDEVEKAERERAEREALEWAAAEVVADEDMSKNDD
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcattaccgtagaagattgcctggaagtcgtgaacaaccgttttgagctggtc
atgatggcctccaagcgcgcccgtcagctcgccaacggcgtgcagccgctgatcgagaat
gccgacgccagcgacaagcccaccgtgatggcactgcgcgagatcgccgcacgccggatc
gacaacgcgctgatcgatgaagtcgagaaggccgaacgcgagcgtgccgaacgcgaagcg
ctggaatgggccgccgccgaagtggtcgccgacgaagacatgtccaagaacgacgattga
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