Xenorhabdus doucetiae: XDD1_2639
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Entry
XDD1_2639 CDS
T03784
Symbol
mnmC
Name
(GenBank) tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase; FAD-dependent cmnm(5) s(2)U34 oxidoreductase]
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
xdo
Xenorhabdus doucetiae
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xdo03016
]
XDD1_2639 (mnmC)
Enzymes [BR:
xdo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
XDD1_2639 (mnmC)
Transfer RNA biogenesis [BR:
xdo03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
XDD1_2639 (mnmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
Pyr_redox_2
Pyr_redox_3
FAD_binding_2
HI0933_like
Mqo
Pyr_redox
NAD_binding_8
FAD_oxidored
ThiI
NAD_binding_7
RNA_pol_Rpc34
GIDA
Motif
Other DBs
NCBI-ProteinID:
CDG18338
UniProt:
A0A068QTN4
LinkDB
All DBs
Position
complement(2807207..2809285)
Genome browser
AA seq
692 aa
AA seq
DB search
MIVINSTGIIVKSSAISNATLSWNEQGTPISEQFDDVYFSNQDGLEETLYVFLQGNHFPQ
RFTTHSRPECVIAETGFGTGLNFLTLWRAFAHFRQQYPEAALKRLHYISFEKYPLQAADL
QTAHQRWPELKAFSAQLCQQWPLPLAGCHRLILDNGAITLDLWFGDVNDLLPKIHSNLTG
KVDAWFLDGFAPAKNPQMWSEQLFAAMAKFCRPEGTFATFTSAGVVRRGLQAAGFNVTKV
KGFGRKREMLTGTLSPLSDPLPLPDTPWFSRQAATHTDDIAIIGGGIASALTALALLRRG
AKVTLYCQDAQPAQNASGNQQGALYPLLNGNNDPLERFFTSAFTFARRQYDQLIDENVSF
DYQWCGVSQLAYDEKSANKIGKMRRTAWPDEMALGMERRQLSHVSGLDVNYDGIHYPQGG
WLYPAQLTQAVIKRAEQQGMKVYFNHKMTQLIQNENGWQLQIEHKENRQCKDHNVVIIAN
GHCLPQFEQTQKLPVTAVRGQVSHIPTTDDLRQLKSVLCYDGYMTPVNPNNQYHCLGASY
QRNQLNTLYSSAEQQENRDRLLKCFPDVDWPQQVDISAEKSRQGIRCVIRDHMPMIGNVP
AFSELMDKYANLSLQINTNKVIDESPYYPNLFVLGALGSRGLCSAPLSAELLASQIFGEA
LPLDDETLAALHPNRFWVRKLLRGKAVKAEKP
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgattgttatcaacagtacaggcattattgtgaaaagcagtgctatcagcaacgcaacc
ctgagctggaatgagcagggcacccccatttcagagcagtttgatgatgtttatttttca
aatcaagatggcttggaagaaacattgtatgtatttttgcaaggtaatcatttccctcaa
cgttttacgacccattcccgtccagagtgcgttattgcagaaaccggatttggtactgga
ttgaatttcctgacactttggcgagctttcgctcatttcagacaacaatatcccgaagct
gcattaaaacggctgcattatatcagttttgaaaaatacccattacaagcggctgacctg
caaacagcgcaccaacgctggccagaacttaaggcgttttctgcacaattatgccagcaa
tggcccttgccgctggctggctgccatcgattaattctggataatggcgcgatcactctg
gatctctggtttggggatgtcaatgatctgttacctaagatccattcaaacctgacaggg
aaagttgatgcctggtttttagatggttttgcgccagcaaaaaatccacaaatgtggagt
gaacagttgttcgctgcaatggcaaaattttgccgtcctgaagggacatttgcgaccttt
acctccgccggagtcgtccgccggggattgcaggcagcgggctttaatgtcactaaggtc
aaaggattcgggcgtaaacgagagatgctgaccggcaccttatcgccattgagtgatcca
cttcccttacctgatacgccgtggttttcccgccaagcggctacccataccgatgatatt
gccatcatcggcggcggtattgccagcgcactgaccgcactggcgctattgcgccgtggc
gccaaggtcacgctatattgtcaggatgcgcaacctgctcaaaatgcctccggtaatcaa
caaggggcgctttatcccttattgaatggtaataacgatccattagaacgcttttttaca
tcagcatttacgtttgcccgccgtcagtacgatcagttaattgacgaaaatgtatccttt
gactaccaatggtgtggggtcagccagttagcttatgatgaaaaaagcgcgaataaaatt
ggtaaaatgcgacggacagcatggccggacgaaatggcccttggtatggagcgccgccaa
ttaagccacgtcagtgggttagatgtaaattacgatggcattcactatccacaaggaggg
tggttatatcccgcacaattgactcaagcggtgattaaacgggctgaacaacagggaatg
aaggtttattttaatcataaaatgactcagctcattcaaaatgaaaacggctggcagttg
caaattgaacataaagaaaatcggcaatgcaaggatcacaacgtggtcattattgccaat
ggtcactgcctgccgcaatttgaacaaactcaaaaactccctgtcactgcggttcgtggt
caagttagccatattccaaccacggatgacctgcgccaattaaaaagtgtgctgtgttac
gatggctacatgacgcccgtcaatcctaacaatcaatatcactgtctcggtgccagttat
cagcgcaatcagttgaacactctgtattcctctgccgagcaacaagaaaaccgcgatcgt
ttattaaaatgttttcctgatgttgattggccacaacaggttgacatttcagcagaaaaa
tcccgccagggtatccgctgtgtcattcgggatcatatgccaatgatcggaaatgtgcct
gctttcagtgagcttatggataaatatgcgaatttatccctacaaataaacacgaataag
gttattgacgaatccccttattacccgaatttatttgtgcttggtgcgttaggctcgcgt
ggattatgctctgcgcctttaagtgcagaattactggctagccagatttttggcgaagcg
ctaccgcttgatgatgaaacattggcggctttacacccaaatcgcttttgggttcggaag
ctattacgtggcaaagcggtgaaggcagaaaaaccttaa
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