Xylella fastidiosa Hib4: XFHB_08600
Help
Entry
XFHB_08600 CDS
T04925
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
xfh
Xylella fastidiosa Hib4
Pathway
xfh00550
Peptidoglycan biosynthesis
xfh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xfh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
XFHB_08600
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xfh01002
]
XFHB_08600
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xfh01011
]
XFHB_08600
Enzymes [BR:
xfh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
XFHB_08600
Peptidases and inhibitors [BR:
xfh01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
XFHB_08600
Peptidoglycan biosynthesis and degradation proteins [BR:
xfh01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
XFHB_08600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Peptidase_S13
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
ALR06894
UniProt:
A0A1L2B1S8
LinkDB
All DBs
Position
complement(1783449..1784639)
Genome browser
AA seq
396 aa
AA seq
DB search
MKFLFATVAIFMCAVSSAVAQVPQPVPTKAPAIPIPKAPAPAVAKAWVVMDFASGQVLAG
ENIHTHLAPASLTKVMTSYVIAAEIKNGKVHRDDQVMMTENAWRKGGAGTDGSYSGFPVN
KAARLEDMEQGMIVQSGNDAAIALAEHVAGSEEAFASLMNSYAQRIGMKNSHFVDATGLS
AEGHYSSAYDMALLGRALIRDSPETYAYNKVKELVVNGIKQSNRNLLLWRDPSVDGIKTG
HTSEAGYCIINSAKRGDQRILTVVMGDVSEKKRAEDSLALLNWGFRFFETHTLYEPGKVV
IKQKIWKGQVSEVQLGVARPLFVTVQRGRYNDLKPSIEVPRNLEAPIKPGQSVGKVKVTL
DGKVVAQAPLAAMAGVEKGGFFKRLWDAFWMWWELK
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
gtgaaattcctctttgcgacagttgctatcttcatgtgtgcggtgagttcggctgttgcg
caagttccgcagcctgtccctactaaagctcctgcaataccgattcccaaggcgccagcg
cctgctgtggccaaagcatgggttgtgatggactttgcgtccggtcaggtgcttgctggg
gagaacatccatacccatcttgctccggccagcctgaccaaggtgatgacttcctatgtg
atcgctgctgagatcaagaacggcaaagtgcatcgtgatgatcaggtgatgatgaccgaa
aatgcttggcgcaagggaggcgctggtaccgatggcagttacagtggctttcctgtcaat
aaggctgcgcgcttggaggatatggagcagggcatgattgtgcagtcggggaatgatgct
gcgatcgcgctggctgagcatgtggctggtagcgaggaggcattcgcttcgttaatgaat
agctacgctcagcgcattgggatgaagaattcgcacttcgtcgatgcgacaggcttgagt
gctgagggccattactccagtgcgtatgacatggcgctgcttggtcgcgcgttgattcga
gattctccagaaacctacgcctataacaaagtgaaggagttggtggtcaatgggatcaag
cagtcgaaccgcaatttgctgctgtggcgcgacccctctgtggatggtattaaaacaggc
catacttccgaggcaggctattgcattattaattcggccaagcgtggtgatcagcgcatc
ctgaccgttgtgatgggcgatgtttccgagaaaaagcgtgctgaggatagcctggccttg
ttgaactggggctttcgctttttcgagactcacaccctctatgagcctggcaaggtggtg
atcaaacagaagatatggaaggggcaagtttccgaagtgcagttaggggtggcgcgtccg
ctattcgtcactgtacagcgtggtcgctataacgaccttaaacccagtatcgaagtgcca
cgtaaccttgaagcaccgattaaacctggacagtcggtgggtaaggtgaaagtcacgctg
gatggtaaggtcgtcgcacaggcaccgttggcagcaatggctggcgtcgagaagggagga
ttctttaagcggctatgggacgccttctggatgtggtgggagcttaagtga
DBGET
integrated database retrieval system
