Xanthomonas fragariae: BER92_03785
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Entry
BER92_03785 CDS
T04667
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
xfr
Xanthomonas fragariae
Pathway
xfr00470
D-Amino acid metabolism
xfr00550
Peptidoglycan biosynthesis
xfr01100
Metabolic pathways
xfr01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
xfr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BER92_03785
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BER92_03785
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
BER92_03785
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xfr01011
]
BER92_03785
Enzymes [BR:
xfr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
BER92_03785
Peptidoglycan biosynthesis and degradation proteins [BR:
xfr01011
]
Precursor biosynthesis
Amino acid ligase
BER92_03785
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp_3
ATP-grasp
ATPgrasp_ST
RimK
Motif
Other DBs
NCBI-ProteinID:
AOD16485
LinkDB
All DBs
Position
844463..845386
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AA seq
307 aa
AA seq
DB search
MPAAFGRVAVLLGGTSSEREVSLNSGSNVLEALLARGVDAQPVDGIPALAQALVEQRFDR
VFNVLHGHNGGGEDGIVQGLMEAFKVPYTGSNVLGSALSMDKIRTKQVWLSLGLSTPRYA
RLAAGASANEIHAAAQQIGLPVIVKPANEGSSVGISRVFDQAQLEEAVVLAARYDGALLM
EQLIEGDELTVAVLGDTALPSIRIVPKGQWYDYNAKYVADDTQYLCPGLEGDAEVQIRQL
ALDAFRAAGARGWGRVDVMRDRSSGQLYLLEVNTAPGMTSHSLVPKAARQLGIDFEELVW
RVLEQTL
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atcccggccgctttcggtcgtgtggccgtgctgctcggtggcacttcgtccgagcgcgag
gtgtcgctgaattccggcagcaatgtgctggaggcactgctcgcgcgcggtgtcgatgca
cagccggtcgacggtattccggccttggcgcaggctttggtggagcagcgtttcgatcgc
gttttcaacgtgctgcacgggcataacggcggcggcgaagacggcatcgtgcaaggcctg
atggaagccttcaaggtgccgtataccggctccaacgtgctcggttctgcgttgagcatg
gacaagatccgcaccaagcaggtgtggttgtcgttgggcctgtccacgccgcgttatgcg
cgtctggcagctggtgcaagcgccaatgaaattcatgcggccgcacaacagatcggcttg
ccggtgatcgtcaagccggccaacgaaggctccagcgtcggcatcagccgcgtgttcgac
caagcccagctcgaagaagccgtggtgctggctgcgcgctacgacggcgcgttgctgatg
gagcagctgatcgaaggcgacgaactcaccgtggcggtgctcggcgacaccgcgttgccg
tcgatccgcatcgtgcccaagggccagtggtacgactacaacgccaagtacgtggccgac
gacacccagtatctgtgcccgggcctggaaggcgatgccgaagtgcagatccgccaactt
gcactggatgccttccgcgccgccggcgcccgcggctggggccgcgtagatgtgatgcgt
gaccgcagtagcggccagctatatctgcttgaagtgaataccgcccccggcatgaccagc
cactcgctggtgcccaaggcagcccgccagctcggcatcgatttcgaagaactggtctgg
cgcgtattggagcagacgctgtga
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