Xanthomonas citri pv. fuscans: XFF4834R_chr21160
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Entry
XFF4834R_chr21160 CDS
T03094
Symbol
fadB
Name
(GenBank) probable 3-hydroxyacyl-CoA dehydrogenase, NAD binding
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
xfu
Xanthomonas citri pv. fuscans
Pathway
xfu00071
Fatty acid degradation
xfu00362
Benzoate degradation
xfu00650
Butanoate metabolism
xfu01100
Metabolic pathways
xfu01120
Microbial metabolism in diverse environments
xfu01200
Carbon metabolism
xfu01212
Fatty acid metabolism
Module
xfu_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
xfu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
XFF4834R_chr21160 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
XFF4834R_chr21160 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
XFF4834R_chr21160 (fadB)
Enzymes [BR:
xfu01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
XFF4834R_chr21160 (fadB)
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GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DAO
NAD_binding_2
ApbA
Shikimate_DH
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
CDF61657
LinkDB
All DBs
Position
complement(2455207..2457579)
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AA seq
790 aa
AA seq
DB search
MSNPLLVRRAAVLGAGVMGAQIAAHLTNAGVDTVLFDLPAKEGPADGIVLKAIANLGKLS
PAPLASKALAEAITPANYESGLEQLRDCDLIIEAIAERMDWKQDLYKKIAPFVSEHAVLA
SNTSGLGINKLSDVLPEQLRHRFCGVHFFNPPRYMHLAELIPAKGTDKAVLEGLEAFLVT
TLGKGVVYAKDTPNFIGNRIGVFSILSTIHHTQEFGLGFDEVDALTGPLVGRPKSATYRT
SDVVGLDTMAHVIKTMGDTLPDDPWHQYFTSPKWLEALIAKGALGQKVGAGIFRKVGKDI
VVLDLHKQDYRAADRSAAPEVVEILKIKNPAEKFAKLRESEHPQAQFLWATFRDLFHYSA
FHLADIAETARDVDLAIRWGYGWSLGPFETWQAAGWKQVAQWIAEDISNGKSMSSAPLPN
WGFDGRDGVHGAEGSYSPARDAKLPRSALPVYKRQRFPDPLLGEQFSPGETVFENDGVRM
WHDGDDIAVVSFKTKMNTVSDHVLNGLQEVVGRAEKDFAGLVIWQQKEPFSAGADLAGAL
GLLQAGKVDAFEALVANFQATSQRIKYAQVPVISAVRGLALGGGCEFQMHSAKTVASLES
YIGLVEAGVGLLPAGGGLKEIAVRASIAAGPGGDVFAELKKTFETVAMAKVSNSAVNAKE
LGLLRATDKVVFNSYESLHIAKAEARALAEGGYRAPLPARHIQVAGDVGIATFKMLLVNM
LEGRFISEYDYEIASRIATVVCGGEVDRGALVDEEWLLKLERKHFVELAQQEKTQARIGH
MLKTGKPLRN
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacccgttgctagtccgtcgcgccgccgtgctcggtgccggcgtcatgggcgcg
cagatcgccgcccacctcaccaatgccggtgtcgacaccgtgctgttcgacctgcctgcc
aaggaaggcccggccgacggcatcgtactcaaggcgatcgccaatctcggcaagctgagc
cctgccccgctcgccagcaaggcgctggccgaggcgatcacgccagccaactatgagagc
gggctggagcaactgcgcgactgcgatctgatcatcgaagcgatcgccgaacgcatggac
tggaagcaggacctgtacaagaagatcgccccgttcgtctctgagcatgcagtgctggca
tccaatacctccggcctgggcatcaacaagctgtcggatgtgttgcccgagcagctgcgc
caccgcttttgcggcgtgcacttcttcaacccgccgcgctacatgcacctggccgagttg
attccggccaagggcaccgacaaggccgtgctcgaaggcctggaagccttcctggtgacc
acgctcggcaagggcgtggtgtatgccaaggacacgccgaacttcatcggcaaccgcatc
ggcgtgttctcgatcctgtccaccatccatcacacgcaggaattcggcctgggctttgac
gaagtcgatgcgctgaccggcccgctggtcggccgtcccaagtcggccacctatcgcacc
tccgatgtggtcggcctggacaccatggcgcacgtcatcaagaccatgggcgacaccttg
ccggacgacccgtggcatcagtatttcacctcgccgaagtggctggaggcgctgatcgcc
aagggcgcgctgggccagaaggtcggggccggcatcttccgcaaggtcggcaaggacatc
gtggtgctggacctgcacaagcaggattaccgcgccgccgatcgcagtgccgcaccggaa
gtggtcgagatcctcaagatcaagaatccggccgagaagttcgccaagctgcgcgagagc
gagcatccgcaggcgcagttcctgtgggcgacgttccgcgacctgttccactacagcgcc
ttccatttggccgatatcgccgagaccgcacgcgatgtggatctggcgattcgctggggc
tacggttggtcgctgggcccgttcgagacctggcaggcagcgggctggaagcaggtggcg
cagtggatcgccgaagacatttccaacggcaagagcatgagcagcgcaccgttgccgaac
tgggggttcgacggtcgcgatggcgtgcatggcgccgaaggctcgtatagcccggcgcgc
gacgccaagctgccgcgctcggcgctgccggtgtacaagcgccaacgcttccccgatccg
ttgctgggcgagcagttctcgcccggcgaaaccgtgttcgagaacgacggcgtgcgcatg
tggcatgacggcgacgacatcgcggtggtcagcttcaagaccaagatgaacaccgtctcc
gaccacgtgctcaatggcttgcaggaagtcgttggccgcgccgagaaggacttcgccggc
ctggtgatctggcagcagaaggagcccttctccgccggcgccgatctggccggcgcgctc
ggcctgctgcaggctggcaaggtcgatgccttcgaagcattggtcgccaatttccaggcc
accagccagcgcatcaagtacgcgcaggtgccggtgatctcggcggtgcgcggcttggca
ctgggcggcggttgcgagttccagatgcacagcgccaagacggtggcctcgctggagagc
tatatcggcctggtcgaagctggcgtcggcctgctgccggccggcggcggcctgaaggaa
atcgcggtacgtgcgtcgatcgccgcaggcccaggcggcgacgtgtttgccgagctgaaa
aagaccttcgaaaccgtggcaatggccaaggtctccaactcggcggtcaatgccaaggaa
ctgggcctgctgcgcgccaccgacaaagtggtgttcaacagctacgagagcctgcacatc
gccaaggccgaagcgcgcgcactggccgagggcggctaccgcgccccgctgccggcacgc
cacatccaggttgccggcgacgtcggcatcgccaccttcaagatgctgctggtcaacatg
ctggaaggccgcttcatcagcgaatacgactacgaaatcgccagccgcatcgccacggtg
gtgtgcggtggcgaagtcgatcgcggcgcgctggtcgatgaagaatggctgctcaagctg
gagcgcaagcactttgtcgaactggcccagcaggaaaagacccaggcccggattgggcac
atgttgaagacgggcaagccgttgaggaactga
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