Xanthomonas hortorum pv. gardneri: BI317_22960
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Entry
BI317_22960 CDS
T04668
Name
(GenBank) ABC transporter
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
xga
Xanthomonas hortorum pv. gardneri
Brite
KEGG Orthology (KO) [BR:
xga00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xga02000
]
BI317_22960
Transporters [BR:
xga02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
BI317_22960
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_29
AAA_21
AAA_16
AAA_22
ABC_ATPase
RsgA_GTPase
DEAD
ATP-synt_ab
AAA_25
AAA_30
MMR_HSR1
Zeta_toxin
AAA_24
DLIC
DO-GTPase2
AAA_18
AAA_33
AAA_23
Motif
Other DBs
NCBI-ProteinID:
APP87159
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All DBs
Position
complement(5040119..5041876)
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AA seq
585 aa
AA seq
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MPDTPARFLWHYVRQRPWHFSGLLLLIIGAAGCAVSVQYGMKVLVDAMATDQRSQANVWW
PLGVFIGLIAVENLLWRLGGWLGCSTVVASVVDIRVDLFRHLTGHPMRYFSEHFAGALGN
RITALGSAAGQIYGGLAWKIVPPIVDFIGAIVLLLTVDWRMAATLVGFIGIVAAIITSFG
IRGRAKHQRFAAQAARVGGELVDAVSNVWTIKAFAARDRESARLAEQIGYEAVAHRRSWM
YVEKARVIHDICLSLMAGGMLIWAIGMWRAGAVSAGDVVLVSALTFRILHGSRDLALTLV
DTTQQLGAIADTLQIILQPHALVDADAPLAMAEGDVRFEHVRFAYPDRPALLHDLNLHIP
AGQKVGIVGPSGAGKSTLIALIQRLDDVESGRVLIDGQDIRSVSQDSLREKIAVVPQETA
LFNRSIADNIRYGRPDANDADVQEAARHAFCDGFIRELPQGYDTQVGERGVMLSGGQRQR
LGIARAFLKDAPILILDEATSALDTESEAEIQAALDHLMRDRTVLAVAHRLSTVIGFDRV
VVLQEGRVIEDGNPAQLRGHGGVFDGLWQRQAAGFEQAAPDQTQA
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
ttgccggacacgccggcacgctttctgtggcattacgttcgccaacggccctggcatttc
agtgggttgttgttgttgatcatcggcgccgccggctgcgcggtgtcggtgcagtacggc
atgaaggtgctggtcgatgcgatggccaccgatcaacgtagccaggccaatgtgtggtgg
ccgctgggcgttttcatcggcctgattgcggtggaaaacctgctgtggcgcctgggtggc
tggttgggctgcagcaccgttgttgccagcgtggtggatatccgggtggatctgttccgc
catctcaccgggcaccccatgcgctatttcagcgagcatttcgccggtgcgctgggcaat
cgcatcaccgcgctcggcagcgcggccgggcagatctacggcgggctggcgtggaagatc
gtgccgccgatcgtggatttcatcggtgccatcgtgttgttgctgaccgtggattggcgc
atggcagccacgctggtcggcttcatcgggattgtggcggccatcatcaccagcttcggc
atccgcggccgcgccaagcatcagcgctttgccgcgcaggccgcacgcgtgggcggtgag
ttggtggatgcggtgtcgaatgtatggacgatcaaggcatttgccgcgcgcgatcgcgaa
agcgcacggctggccgaacagatcggctatgaagcggtcgcccaccggcgcagctggatg
tatgtggaaaaggcccgcgtcatccatgacatctgtctgtcgttgatggccggcggcatg
ttgatctgggcaatcggcatgtggcgtgccggcgcggtgagcgcaggcgatgtggtgctg
gtcagcgcgctgacgtttcgcatcctgcatggctcgcgcgatctggcgctgacgctggtg
gataccacccagcagctgggcgcgatcgccgataccttgcagatcatcctgcagccgcat
gcgttggtggacgcggatgcgccattggcgatggccgaaggcgatgtgcgtttcgaacat
gtgcgctttgcctatcccgatcgcccggcgctgctgcacgacttgaatctgcatattccc
gcaggccagaaggtaggcatcgtcgggccgtccggcgccggcaaatcgaccttgattgcg
ctgatccagcgcctggacgatgtggaatccgggcgcgtgctgatcgacggccaggacatc
cgcagtgtcagccaggacagcctgcgcgaaaagatcgcagtggtgccgcaggaaaccgcg
ctattcaaccgcagcattgccgacaacatccgctatggccggccggacgccaacgatgca
gatgtgcaggaggccgcgcggcatgccttctgcgatggattcatccgggaactgccgcaa
ggctacgacacccaggttggcgagcgcggggtgatgttgtccggtggtcagcggcagcgg
ctgggcatcgcgcgtgcgtttctcaaggacgcaccgatcctgatcctggacgaagccacc
tcggcactggacaccgaatcggaggcggaaattcaggccgcgctggatcatctgatgcgc
gaccgcaccgtgctggcggtagcccatcggctatccacggtgatcggcttcgatcgcgtc
gtggtgctgcaggaaggccgcgtgatcgaagacggcaatcctgcacagctgcgcgggcat
ggcggcgtcttcgacgggttgtggcagcgccaggcggctggattcgagcaggcagcgcct
gaccagacgcaagcgtaa
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