Xanthomonas hortorum pv. gardneri: BI317_23465
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Entry
BI317_23465 CDS
T04668
Name
(GenBank) 3-methylcrotonyl-CoA carboxylase
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
xga
Xanthomonas hortorum pv. gardneri
Pathway
xga00280
Valine, leucine and isoleucine degradation
xga01100
Metabolic pathways
Module
xga_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
xga00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
BI317_23465
Enzymes [BR:
xga01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
BI317_23465
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
ATP-grasp
Dala_Dala_lig_C
MCC_alpha_BT
Biotin_lipoyl_2
HlyD_3
ATP-grasp_3
GARS_A
ATP-grasp_4
UBA_5
Motif
Other DBs
NCBI-ProteinID:
APP86647
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All DBs
Position
5144288..5146315
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AA seq
675 aa
AA seq
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MTQRESNATATQTYFDKILIANRGEIACRVIATCRKLGIATVAVYSDADRDARHVRLADE
AIHIGPAPAQQSYLRGEVILDAARASGAQAIHPGYGFLSENAAFADACAQAGIVFIGPPA
AAIRAMGDKSAAKALMQRAGVPLTPGYHGDEQAPAFLRAQADAIGYPVLIKASAGGGGKG
MRRVDASDAFEEALASCQREARSAFGNAQVLVEKYVERPRHIEIQVFGDTQGEVVYLFER
DCSVQRRHQKVLEEAPAPGMSEQRRAAMGKAAVDAARAVGYVGAGTVEFIAGPDGDFYFM
EMNTRLQVEHPVTELITGTDLVEWQLRVAAGKPLPQRQHELRIHGHALEARLYAEDAERG
FLPSTGTLRQLQLPAPSAHVRIDAGVEQGDTISPYYDPMIAKLIVWDVDRPAALARMREA
LAQCHAVGVTTNSAFLLRLVGTKAFASADLDTALIEREHATLFPQAHAPDSAWWCLAAVL
MAEAVPNATPDPADPFSPWGNTDGWRIGVHAAHAITLEAAGERRQLGVRRLADGWQVTDL
GNTHALRYQTQGTALRVEMDGRQWRAQVLRDGSTLTLIGAEDRAVFRHHDALVEADQPAH
ETGGLTAPMPGRIVSLVAAVGQPVTRGQALVVLEAMKMEHTLHAPGDGTVQAYLVAEGDL
VADGVALVEFVSASA
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgacccagcgcgaatccaacgccacagcaacacagacgtacttcgacaagatcctgatc
gccaatcgcggcgagatcgcgtgccgggtcattgccacctgtcgcaagctcggcatcgcg
acggtggcggtgtattcggatgccgatcgcgatgcgcggcatgtacgcctggccgatgaa
gcgatccatatcggtccggcaccggcgcagcagagctacctgcgtggcgaggtcattctc
gacgccgcacgcgcaagcggcgcgcaggcgatccatccgggttatggctttctttcggag
aatgcggcgtttgccgatgcctgcgcgcaggccggcatcgtgtttatcggcccacccgca
gccgcgattcgcgcgatgggcgacaagagtgcggccaaggcgctgatgcaacgcgccggc
gtgccgttgacgcctggctaccacggcgacgaacaggcgccggccttcctgcgcgcgcag
gccgatgcgatcggctatcccgtcttgatcaaggccagcgccggcggtggcggcaagggt
atgcgccgcgtggacgcaagcgatgcattcgaagaagcattggccagctgccagcgcgag
gcgcggtctgcattcggcaatgcgcaggtgctggttgaaaagtatgtcgagcggccacgg
catatcgagatccaggtgttcggcgatacgcagggcgaggtggtatatctgttcgaacgc
gactgctcggtgcagcgccgccatcaaaaggtgctggaagaagcgcccgcccccggcatg
agcgaacaacgccgcgctgcgatgggtaaggccgccgtggacgccgcacgcgccgtgggc
tatgtcggtgcgggcacggtggagttcattgccggccccgatggcgatttttatttcatg
gaaatgaacacccggctgcaggtcgagcacccggtgaccgagttgatcaccggtaccgat
ctggtcgagtggcagctgcgtgtggctgccggcaagccgttgccgcagcgtcagcacgaa
ttgcgcatccacgggcatgcgctggaagcgcgcctgtatgcagaggatgccgagcgcggc
tttctgccttcgaccggtacgctgcggcagctgcagctgcctgcgcccagtgcgcatgtg
cgcatcgatgcgggcgtggagcaaggcgacaccatcagcccgtattacgacccgatgatt
gccaagttgatcgtgtgggatgtcgatcgccccgctgcgctggcgcgcatgcgcgaagcg
ctggcgcaatgccatgcggtcggcgtcaccaccaatagtgcgtttctgttgcgccttgtc
ggcaccaaggcgtttgcctcggccgatctggataccgccttgatcgaacgcgagcatgcg
accttgtttccgcaagcgcatgcgccagacagtgcgtggtggtgcctggctgccgtgttg
atggccgaggcagtgccgaacgccacgcccgatccggccgacccgttctcgccgtgggga
aacaccgatggatggcgtatcggcgtgcatgcggcccacgccatcacgctggaggccgca
ggcgagcggcgccagctaggcgtgcggcggctggccgatggttggcaggttactgacctg
ggcaacacgcacgcactgcgctaccaaacgcagggcaccgcgctacgcgtggagatggat
ggacggcaatggcgcgcacaggtcttgcgcgacggcagcacgctgaccctgatcggcgct
gaagaccgtgcggtcttccgccaccacgacgcattggtcgaggcagatcaacccgcgcat
gaaaccggcggcctgactgcaccgatgccgggccgcatcgtgtcgctggtcgccgcggtc
ggccagccggtcacgcgcgggcaagcgctggtggtgctcgaagcgatgaagatggagcac
accctgcacgcgcccggcgatggcaccgtgcaggcgtatctggtcgcagaaggcgatctg
gtcgccgatggcgtcgcgctagtggagttcgtgtccgcgtctgcgtag
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