Xiphias gladius (swordfish): 120794325
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Entry
120794325 CDS
T07311
Symbol
itgb4
Name
(RefSeq) integrin beta-4 isoform X1
KO
K06525
integrin beta 4
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04510
Focal adhesion
xgl04512
ECM-receptor interaction
xgl04810
Regulation of actin cytoskeleton
xgl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120794325 (itgb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120794325 (itgb4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120794325 (itgb4)
04810 Regulation of actin cytoskeleton
120794325 (itgb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xgl04147
]
120794325 (itgb4)
04515 Cell adhesion molecules [BR:
xgl04515
]
120794325 (itgb4)
04090 CD molecules [BR:
xgl04090
]
120794325 (itgb4)
Exosome [BR:
xgl04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
120794325 (itgb4)
Exosomal proteins of bladder cancer cells
120794325 (itgb4)
Cell adhesion molecules [BR:
xgl04515
]
Integrins
Integrin beta subunits
120794325 (itgb4)
CD molecules [BR:
xgl04090
]
Proteins
120794325 (itgb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Integrin_B_tail
Pur_ac_phosph_N
PSI_integrin
I-EGF_1
EGF_2
I-set
Motif
Other DBs
NCBI-GeneID:
120794325
NCBI-ProteinID:
XP_039991228
LinkDB
All DBs
Position
LG9:complement(19046925..19076411)
Genome browser
AA seq
1993 aa
AA seq
DB search
MGRWTLHLSVGLGLLAVLLTYCFAEVNYCLAAKAKNCSECLQAGKGCVYCPDETFNGPRC
DLRENILAHGCSAAAVITAQSSMNIEKTEKINISLQQSQVFPKRVSMTLLPGEEKYLDVE
VFAPTKGPLDLYILMDFSNSMADDLNNLKRMGKELASLVERLSDDYTIGFGKFVDKVVEP
QTDMRPAKLAQPWPDSDPPFSFQNVIKLTKNLDIFTSELQKERISGNLDAPEGGFDAILQ
AAVCGDKIGWRNHSTHLLVFSTESAFHYEADGANVLSGILRRNDESCHLDAAGKYTEDIN
QDYPSIPTLVRLLGKHNIIPIFAVTNHSYTYYQKLKTYFPIAEVGLLQEDSSNILEVMET
AFKNIRSKMSIRAEDRPKAFGAKFMSTSGQIAEYGAFDFKPGAIGKFKVHLKALQMIDNK
PVCQMKPDEKEGTMRIKPTTFNDAVMVQASVFCPTCSCEKNPIFKAARCYGNGDLVCGKC
RCSDGWLSTFCNCSASVSALDTSQCIGPGMTQPCSGRGDCLDCGTCVCYNPDQFEGPYCQ
YDKTQCQRYGGFLCNDRGSCVMGRCACTEGWEGNACECPKSNQTCLDSKGSVCNGRGKCV
CGRCECPNSGIEMTSTCEPNFQAQLGVCEATNSCVQCQAWKTGKKKEKEECDKCPFKIIM
VDELKKSEDVLDSCNFRDEEDDCTYYYTVENAKDPTTGVLEVQVLKKKDCPPASLLWLLP
LILFLLLLLALLLLCCWKYCACCKDCWQSCLALLPCCRRGRMVGFKEDEYLLRQSLLTSD
HLDTPMVRTGPPKGTDVVRWKVTDNVHRGPNHPQALIKPNPKETIQFPISLRLNRLLSDN
LFHPESRDSEQLRKEVADNLNEVYKPIPGAQKVQKTNFRMQRNAGKRQDYTIMDTVLSAP
RSSYPDIVKLTEKNVQSGNFHDLKVVPGYYTVATDREAAGAIEFQEGVESVDVHVPLFVK
DEDDDKKQLQVEAMDVPLGIAEIGKRLVNITIIKEHAASVFSFLQPAYTYSRQDGVANIP
ISREIIEDGRTQVTYRTRDLTAKDKKDYVNVEGDLTYGPGETQKIVPVRLLELGEKDGLL
EDKQVKQFVMDLSNPRQGAKLGRYPRTTITIADQPEPSVMMFKKGTQNFTTSDTTYTIPV
VRTRNQDSPATVKWRTKKAQRFELSGPVKFGPGETEKNIVIDPKAHPGPIQPETFQLELF
DPSSNASIGERKTTHVTVTDGVPKSTETNQMQLKDFISQKATSPGGQLLSPANPAAKATG
PRSIHLNWDPPLGNPMGYKVKYWVYGDPEKEAEVLDVKTPQAELTNLYPYCDYEMRVCAY
NAMGDGHNTDIVECQTLEEVPGEPGRLAFNVIGPTVTQISWAEPPDAYGNITAYEVIYTP
IDDDQKPVGGAKIVKIDNPKKRMLLIENLQNAQTYQYKVRAKNSIGWGSFREATINLASQ
PTRPLSIPIIPDIPIVDAEAGDEYDSYLMYSNDVLKSPGSSKTPSVSGDGWKYVKLVGSN
LDLRKVSWKKQVDIISSRLSTDTETSSDEAPYPSYAQTPLPDYMMNGKWDQNFPFPGGSV
TRNFSTSSSPMSTLSSNYRGAGGSFTTETTTSYMSGSSRRQDVIGGGVHKSEVIMRKRSE
TRGYTDENIRDSIVMADVSSKFPDHGGFGYNGMQSSSQSQFSYSLSQGSRARTQSSDVNE
ALYNLDRVLQDARLSPGVPDTPSRLVFSALGPTALKVSWQEPHCEKDILGYCVLYQLLNG
GDMKQINVTNPAENSVIIQDLLPNHSYLFKVKAQSQEGWGPEREGVITIESPVDPNCPLS
PMPGSPFTLSTPSAPGPLVFTALSPDSLQLSWEKPRKPNGDILGYVVTCEQLHGGGDVRS
FQVNGNDAETSLTVPNLTENVPYKFKVQARTTQGFGPEREGIITIESQDGSALSQYNSQS
MARREVFHMPTEVSTRTNVSHTMLNDPYFSEGMMMTTQHTETSGMVTHQITKEVVQRSVM
GGATVTKKMFYES
NT seq
5982 nt
NT seq
+upstream
nt +downstream
nt
atggggagatggacgttacatctctcagtggggcttgggcttttagccgtcctgttgacc
tactgttttgctgaagtgaactactgcttggctgccaaggccaagaactgctcagaatgc
ttgcaagctgggaaaggctgcgtctactgtcctgatgagacttttaatggccctcgctgt
gacctgcgcgagaatatcctcgcccatggctgcagtgctgctgctgtaattacagctcaa
agcagtatgaacattgaaaagacagaaaaaatcaacatcagccttcagcagtctcaggtg
tttccaaagcgggtaagcatgacgcttctgcctggagaggaaaaatatctggacgtagag
gtgttcgctccaaccaaaggccctctggatctttatattcttatggacttctccaactcc
atggctgatgatttgaacaacttgaagaggatgggcaaagagctggcctcattggtggaa
aggctgtcagatgactacaccattggctttggaaagtttgtggacaaagtggttgagccc
cagactgatatgagacctgccaaactcgcacagccatggcccgacagtgaccctcctttc
tctttccaaaatgtcatcaagctgaccaaaaacttggatatcttcaccagtgagctccag
aaggagagaatatctggcaaccttgacgctcctgagggagggtttgatgccatattgcag
gcggcagtttgtggggataagatcggttggcgaaaccatagcacacatctcttggtgttc
tccactgagtcagccttccactacgaggccgacggcgctaatgtgctgtcgggcatcctg
cggcgcaatgacgagagttgccacctggacgcagcaggcaaatacacagaggatataaat
caggactacccttcaatacccacactggtccgtttgctgggcaaacacaacatcatcccc
atcttcgccgtcaccaaccactcatacacgtactaccagaaactcaagacgtatttccct
attgctgaggttggtctgctgcaagaagattcatccaatatcctggaagtcatggagacg
gcctttaagaatatccgatctaagatgagcatccgtgcagaggatagacccaaggctttt
ggggctaagttcatgtccaccagtggacagattgcagaatatggagcctttgatttcaag
cctggagcaataggcaagttcaaggtgcacctcaaagccctgcagatgatcgacaacaag
ccagtctgtcagatgaaaccggatgaaaaagaggggacaatgagaatcaaacccacaacc
tttaacgatgcggtcatggttcaggcctcggtcttttgtccgacctgcagttgtgagaag
aatcccatctttaaagcagccaggtgctatggcaatggagacctggtgtgcgggaagtgc
cgctgttctgatggctggctgagtacattctgtaactgctcagcgagtgtttcagctctg
gataccagccagtgcataggtccaggtatgacacagccttgttcgggccgcggagactgc
ctggattgtggaacctgtgtgtgctacaacccagatcagtttgagggaccctactgtcag
tacgacaagacccagtgtcaaagatacgggggcttcctctgcaatgaccgtggttcttgt
gtcatgggtcggtgtgcatgtacagaaggctgggagggaaatgcctgtgagtgtcccaag
agcaaccagacctgtctggacagcaaggggagtgtctgcaatgggcgaggtaaatgcgtg
tgcggtcgctgtgagtgtccgaactcgggtatcgaaatgacttcaacctgtgagccaaat
ttccaggcccagctgggcgtatgtgaagctacaaacagttgtgtccagtgtcaagcctgg
aagacaggaaagaagaaggagaaagaggagtgtgataagtgcccattcaaaattatcatg
gtggatgaactcaagaaatcggaggacgtgcttgattcatgcaatttccgtgatgaggag
gacgactgtacatactactacactgttgaaaatgctaaagatccgacaactggagtcctg
gaggttcaagtgctcaagaagaaagattgtccccctgctagcctcctgtggttgctccct
ctcatcttgttcctcttgttactgctggcacttcttctgctctgctgctggaaatactgc
gcctgctgtaaagactgctggcagagctgtcttgccctgctaccttgctgtaggagaggt
cgcatggttggcttcaaggaggatgagtatttgctccgccagtctctgctaacctctgac
catctggatacaccaatggtgaggactggcccaccaaaaggaactgatgttgttcgctgg
aaggtcacagataatgtacaccgaggacccaatcacccccaggctctgataaagcccaat
cctaaagagaccatccagttccccatctccctccggctaaaccggttgttgtctgacaac
ctgtttcaccctgaatccagagactctgagcagctccgcaaggaagtggccgataaccta
aatgaagtgtacaaaccgattcctggggcccagaaggtgcaaaagaccaatttcagaatg
cagagaaatgctggaaaaaggcaggactacaccatcatggataccgtcttgtcagctcct
cgcagcagctatcctgatattgtcaaactcacagagaaaaatgtccagtctggaaacttc
catgacctcaaagtggtgcctggctactacactgtggccacagacagagaggctgcggga
gccatagagttccaagaaggtgtggagtcagtagacgttcacgtgccactctttgtcaag
gatgaagacgatgacaagaaacagcttcaggtggaggcaatggatgtgccactgggcatt
gctgagattggaaaacgtttggtcaacatcaccatcatcaaagagcatgctgccagtgtg
ttctcgttcctccagccggcctacacctacagcaggcaggatggagtggccaatattcca
atcagcagagagatcattgaagatggacgcacacaggtcacctaccgcacgagggacctc
acagccaaggacaagaaggattatgtgaatgtggaaggagacctgacctatggtcctggt
gagacccagaagatagttcctgttcgactgctggagctgggcgagaaagatggcctcttg
gaagacaaacaggtcaagcagtttgtcatggacctcagtaacccacggcagggcgccaag
ctgggacgctacccgagaactactatcaccattgcagaccaaccagagcccagtgtgatg
atgttcaaaaagggcacccagaacttcaccacatctgacacaacctacaccatccctgtg
gtccgcactcgaaatcaggacagccctgccacagtgaaatggcgcaccaagaaggcccag
cgcttcgagctctctggccctgtgaaatttggtcctggagagacagagaagaacatagtg
atcgacccaaaagcccatcctggcccaatccagccagagaccttccaactggagctgttt
gacccaagtagtaatgcttctattggagagaggaagaccacgcatgtcactgtcacagac
ggagttcccaaatctactgagacaaaccagatgcagctgaaggacttcatcagccagaaa
gccacctcccctggcgggcaacttctctccccagcaaaccctgctgccaaagcaactgga
cccagaagcattcacctcaactgggacccaccacttggtaaccccatggggtacaaggtg
aagtattgggtctatggcgacccagagaaagaagccgaggtcttagatgtgaagactcct
caagctgagttgaccaacttgtacccctattgtgactatgagatgcgagtgtgcgcatac
aatgcgatgggagatggccacaatactgacattgttgaatgtcaaaccctggaggaagtg
cctggtgaacctggacgtctggccttcaatgtaatcggtccaactgtcactcagatcagc
tgggcagagcctccagacgcatatggcaatattacggcttatgaggtcatctacacaccc
atcgatgatgatcaaaagccagtgggcggcgcaaagatagtaaagattgacaaccccaag
aaacgaatgctgttgatagagaacctccagaatgcccaaacctaccaatacaaggtccgt
gccaagaacagcataggctggggcagcttcagagaagctaccatcaacctggcatcacag
cctaccagacctctgtccattcccatcattccagacatccctattgtagatgcagaggca
ggagacgagtatgacagctacttgatgtacagcaatgacgtgctaaagtcccctggaagc
tccaagacacccagtgtctctggtgatggctggaaatatgtcaagttggtggggtccaac
ctagatctccgtaaggtgtcgtggaaaaagcaggtggacatcatctccagtcggctcagc
acagacacagagacgagctcagatgaggccccctaccccagctacgctcaaacacccctg
ccagattacatgatgaatgggaagtgggaccagaacttccctttcccagggggatcagtg
acacgcaacttttcaacatcgtcctctcctatgtccaccctgagctcaaactacagagga
gcaggcggctcctttaccacagaaacaaccaccagctacatgtctggaagctctcgtaga
caggatgtgattggaggcggagtacataaatcggaagtcatcatgaggaagcgctcagag
accaggggttatacagatgaaaacattcgggactctattgtcatggcagatgtgtcgagc
aagtttccagatcatggtgggttcggctacaatgggatgcagagcagctctcagagccag
ttcagctacagcctgtctcagggttcgagggccaggacccagtcttcagacgtcaacgaa
gccttatataatctggacagggtgctccaggatgcacgactctctcctggtgtcccagac
acccctagcagactggtgttttctgctctgggtcccactgccctcaaagtcagctggcag
gagccccattgtgagaaagacatacttggctactgtgtcctctaccagctgctcaatgga
ggtgatatgaagcaaatcaatgtgacaaacccagcagagaactctgtgatcatccaggac
ctgctgcccaaccactcctacctatttaaggtgaaggctcagagccaggagggctggggt
ccagaaagagaaggagtcatcaccatcgagtctcctgttgatcccaactgtcccctcagc
ccgatgccaggctcgccatttactctgagcactcccagtgctccaggccccctggtcttc
actgctctgagccctgattccctgcaactgagctgggagaaacctcgcaaacctaacgga
gacatcctgggctatgtggtcacgtgcgagcagctgcatggtggaggcgacgtgcgttcc
ttccaggtgaacggtaacgacgctgagaccagtctgactgtcccaaacctgactgagaac
gttccatacaagtttaaagttcaggctcgaactacacagggcttcggtccagagagggag
ggtatcatcaccatcgagtctcaagatggaagtgcgttgtctcagtacaatagccaatca
atggcaaggagggaggttttccacatgccaacagaagtcagtacacgaaccaacgtctca
cacaccatgctcaacgacccctacttctcagaagggatgatgatgaccacacagcacaca
gagaccagcggcatggtgacccatcaaatcactaaggaagtggtccagaggagtgtcatg
ggaggagccactgtcacaaagaagatgttttatgaatcttaa
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integrated database retrieval system
