Xiphias gladius (swordfish): 120805010
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Entry
120805010 CDS
T07311
Symbol
tsen54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xgl03016
]
120805010 (tsen54)
Transfer RNA biogenesis [BR:
xgl03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
120805010 (tsen54)
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GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
120805010
NCBI-ProteinID:
XP_040010767
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Position
LG3:complement(23943580..23951541)
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AA seq
525 aa
AA seq
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MADQNNTDTGGSLYSEILGPSELFAARSRSHKIPVRGQKDFFPSDSDEQRERLEQSLNEH
WSLISEERVERLGNLVKATWLPSDQIVELQSPAGKFWQTMGFSANGKQYLLPEEALYLME
CGSLQVFYKDLPLSIQDGYERFLSSNTVGLQQYQVFGHLKRLGYVVHRFDPSLEPSSYAR
QLNLLQSHDRAGRQMKRKRSASPSPAPAPAPTSSHTEAQEESPTERMEEDKGSHDGEEDK
TLPESHLTASPETAEVRAATTSTADEGGGRTWWMTDVLGDSGQGTEDGPTSGSSRWDFST
ILFPDLGSAEHLSKCLASPDPSLLPGALGVGVCDVAPWRQRINLRKVTMSSKEQKREENK
QRRQGDVNKDKEVQRCRNWAEYQELLARRQEGRKGRPAHLWSREVSPLHDPTQPIPTGEL
LDKISVIKSTNLLEGASRLKGSDGWRICFSVYQPDSVADFKKSNPGKPYSRMCVCSFDGP
VPDLRAIKLLACQSGDIPVVFAVVDHGDISFYTFKDFQLPTDVYP
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccaaaacaacacagacaccggaggcagtctctacagtgaaatattaggtccg
tcggagctgttcgcagcccggtccaggagtcacaagatcccagtcagaggacagaaggac
ttcttccccagtgactcggacgagcaaagagagcggcttgagcagagcctgaatgagcac
tggagcctcatatcggaggagagagtggagaggctaggaaacctagtgaaggccacgtgg
cttccgagtgaccagattgtggagctccagtctccagctggaaagttttggcagacaatg
ggcttctctgccaatggaaaacagtatctcctccctgaagaggctctctacctgatggag
tgtggatccctgcaggtgttttataaggacttgccactgtccattcaggacggttatgag
agattcctctcctcaaacacagtgggcctccagcaatatcaggtcttcgggcatttgaag
aggcttggctatgtggtgcacaggtttgatcccagtttggagccgtcgtcctacgcgagg
cagctgaacctgcttcagtcacacgacagagcagggagacaaatgaagaggaaacgcagt
gccagccccagccccgcgcccgcccccgccccaacatccagtcatactgaagcacaagaa
gaatcccccactgagagaatggaggaggataaaggcagccatgacggtgaggaggacaaa
acactccctgagtcacacttgacagcctctccagagactgcagaggtacgggctgccacc
acaagtacagcagacgaaggcgggggcaggacctggtggatgacggatgttctcggggac
tcgggccaaggaacagaagacggccccacctcaggttcctcccgctgggacttcagcacc
atccttttcccagacctgggctccgcggagcacctctccaaatgcctggcctctccggac
ccatccctgctgcccggggctttgggtgtgggagtctgtgacgttgccccctggaggcag
aggataaacctgcggaaggtgacgatgtcctcaaaggagcagaagagggaagaaaacaag
caaaggcggcagggggatgtcaacaaagacaaagaggttcagcggtgcagaaactgggca
gagtatcaggagctcctggcgaggcggcaggagggacgtaaaggtcgaccagcacacctg
tggagcagagaggtctcgccgttacatgacccgacacaaccgatccccactggggaactg
ttggataaaatcagtgtgattaaatctacaaatttgctcgagggggcgtccaggttaaaa
gggtcagatgggtggaggatttgtttcagtgtttaccaacctgattcggtggctgacttc
aagaagagcaacccggggaaaccgtactcccgcatgtgcgtgtgcagttttgacggtccc
gtgcccgacctgcgcgctatcaagctgctggcctgccagagtggagacatcccggtggtc
tttgctgtggtggaccacggagacatctccttctacaccttcaaagacttccagctgccg
actgacgtgtacccctga
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