Xiphophorus hellerii (green swordtail): 116710710
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Entry
116710710 CDS
T07363
Symbol
ssu72
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase SSU72
KO
K15544
RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:
3.1.3.16
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116710710 (ssu72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xhe03021
]
116710710 (ssu72)
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116710710 (ssu72)
Enzymes [BR:
xhe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
116710710 (ssu72)
Transcription machinery [BR:
xhe03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
116710710 (ssu72)
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
116710710 (ssu72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssu72
Motif
Other DBs
NCBI-GeneID:
116710710
NCBI-ProteinID:
XP_032405781
LinkDB
All DBs
Position
20:complement(17463543..17468079)
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AA seq
194 aa
AA seq
DB search
MPSHPLRVAVVCSSNQNRSMEAHNILSKRGFDVRSFGTGSHVKLPGPSPDKPNVYDFKTT
YEQMYNDLVRKDKELYTQNGILHMLDRNKRIKAKPERFQLCKDKFDLVITCEERVYDQVL
EDLNSREQETLQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTDDMENEIDELLQEFE
DKSNRPFLHTVCFY
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgccgagccatccgctgcgtgtagcggttgtttgctcgagcaaccagaaccgcagtatg
gaagcgcacaatatcctcagcaaacgtggatttgacgtccgatcatttgggactgggtct
catgtgaagctacctggtccatccccggataaacctaatgtgtatgacttcaaaacaact
tatgaacagatgtacaacgacttggtccgaaaggacaaggaactatatacacagaatggg
atcttacacatgctggaccgcaacaagcgcatcaaagcaaaaccagagcgctttcaattg
tgcaaggataaattcgacctggtcataacctgtgaagagagagtctatgaccaagtcctg
gaggatttgaattcaagagagcaggagacgttacaaccagttcatgtaatcaatgtagat
attcaggacaaccacgaggaggccacgttgggagccttcctcatctgcgagttgtgtcag
tgtatccagcacacagacgacatggagaacgaaatcgacgagctcctgcaggagtttgag
gacaagagcaacaggccttttctccacaccgtctgcttctactga
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integrated database retrieval system