KEGG   Xiphophorus hellerii (green swordtail): 116710710
Entry
116710710         CDS       T07363                                 
Symbol
ssu72
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase SSU72
  KO
K15544  RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    116710710 (ssu72)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xhe03021]
    116710710 (ssu72)
   03019 Messenger RNA biogenesis [BR:xhe03019]
    116710710 (ssu72)
Enzymes [BR:xhe01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     116710710 (ssu72)
Transcription machinery [BR:xhe03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     116710710 (ssu72)
Messenger RNA biogenesis [BR:xhe03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     116710710 (ssu72)
SSDB
Motif
Pfam: Ssu72
Other DBs
NCBI-GeneID: 116710710
NCBI-ProteinID: XP_032405781
LinkDB
Position
20:complement(17463543..17468079)
AA seq 194 aa
MPSHPLRVAVVCSSNQNRSMEAHNILSKRGFDVRSFGTGSHVKLPGPSPDKPNVYDFKTT
YEQMYNDLVRKDKELYTQNGILHMLDRNKRIKAKPERFQLCKDKFDLVITCEERVYDQVL
EDLNSREQETLQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTDDMENEIDELLQEFE
DKSNRPFLHTVCFY
NT seq 585 nt   +upstreamnt  +downstreamnt
atgccgagccatccgctgcgtgtagcggttgtttgctcgagcaaccagaaccgcagtatg
gaagcgcacaatatcctcagcaaacgtggatttgacgtccgatcatttgggactgggtct
catgtgaagctacctggtccatccccggataaacctaatgtgtatgacttcaaaacaact
tatgaacagatgtacaacgacttggtccgaaaggacaaggaactatatacacagaatggg
atcttacacatgctggaccgcaacaagcgcatcaaagcaaaaccagagcgctttcaattg
tgcaaggataaattcgacctggtcataacctgtgaagagagagtctatgaccaagtcctg
gaggatttgaattcaagagagcaggagacgttacaaccagttcatgtaatcaatgtagat
attcaggacaaccacgaggaggccacgttgggagccttcctcatctgcgagttgtgtcag
tgtatccagcacacagacgacatggagaacgaaatcgacgagctcctgcaggagtttgag
gacaagagcaacaggccttttctccacaccgtctgcttctactga

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