Xiphophorus hellerii (green swordtail): 116724038
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Entry
116724038 CDS
T07363
Name
(RefSeq) lipoxygenase homology domain-containing protein 1-like
KO
K24822
lipoxygenase homology domain-containing protein 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xhe03037
]
116724038
04990 Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
116724038
Cilium and associated proteins [BR:
xhe03037
]
Other cilia and associated proteins
Stereociliary proteins
116724038
Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
Other domain-containing proteins
Others
116724038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLAT
ATS3
Motif
Other DBs
NCBI-GeneID:
116724038
NCBI-ProteinID:
XP_032425237
LinkDB
All DBs
Position
8:complement(20044541..20078750)
Genome browser
AA seq
2426 aa
AA seq
DB search
MPSKQKKSTALEETEEVDDEVEETEPNLKESGQGLTHGDATKRGKSRRKHKSTERSETQE
PPEKEKKEKEGDKVKKKKKKPNDDADPEADATVSSKDAEGEQNNNEATTKPRKDKSERLK
EEVTEGKKKQKKKSSVEIPEGEEEMGSKDKKSKNGKKKKKKSHDDDGEEPLIEEDEEEEE
DSKKKKKKKAKKSSGDSDDDKKKKGKKSKSKQVDYALIYQNELFNYHTDSSDGYEDEYYK
KKVYEVVTVTGDVKGAGTDANVFVTLFGDFGVSPKVHLASNTEKRSRNAFEKNKTDVFRI
KTQNIGPIKKLRIEHDNTGMSASWFLDRVVVTDMIRPHLRFYFPCNNWLSREEGDNLFVR
DLLGSLNPMDVPKLNKYLVSVFTADMKGSGTDADVFLNIFGEHGDTGERRLDSDKDNFER
GSEDKFTIEAPNLGRLRKITIGHNNRGSSAGWFLDKVMIDDMGNKEIYEFPVNRWFAMDE
DDGKIQRDVLVGSMQPMGIIYNVQVMTGDIRGAGTNSKIHMVMHGSKGLKNSGKIFLEGG
AFERALIDTFNVEICELISPLSRVTIGHDNGAVGAGWYCEKVVIYCPFTGIEQTFPCGMW
LDEDEGDGLIERELYEMVSLRQKKQKKYPWSLWIWTSDIKGAGTDAQVFLQIYGEKGKSD
EIKLENNSDSFEQGQLDKFMIEMPDMGRLLKLRIWHEKRNPFAGWHLAKVTLLKTLTMDK
YSFECGRWLDINEDDNEIVRELPATGALNDEPLPLIKYRVTICTGNVSGSGTDASVFLNV
IGDLGDTGERLMFMSKNNVNKFEKGNHDEFLIESVFLGQVRRVRVGHDGRGGGCGWYLDK
VLVREEGQPESSATEFPCFRWLDRNEDDGQIIRELVPAGDGVRLFNVGYHIAIKTGSVNG
ASSDSKVFVKLYGEKGDTDKVILAVSDNDLRNYFETARTDIFTLDTYDIGKINRLLIGHT
NEGLRAGWFLDSVQISVPVHGMQYMFPSHRWLCKDEADGKVEVEIYPSEVLEIEKLINYE
ITVVTGDMRSAGTNADVFCQIYGDEGKTEILALKSRSNNFERGTTEIFKIEALDVGKIYK
IRIFHDGKGIGDGWFLEMVDIKRLTMAMVQIEVKKEETTKKDKKKDKKKKKKEEEEVEII
EELQEVVETFTFACSRWLARDEEDGEIVVELLTDSNEELEMNSYEVYVYTGTMWGAGTDA
KVYITIYGESGDTGERWLRKSNRLNKFEKGQEDVFSLTAVDLGVLKKLRIRHDNSQASAG
WFLDRVEIIDTKDDTTYFFPCKRWLAVDEDDCQLARELVPVDEAFMKKGDEDEDDSEATL
GLEQKAMSTTYTVRIKTGDKKYAGTDANVFMTLFGTKDDTGIITLKASKTHRNKFEKGMI
DEFTVEAVDLGPLRKLRIGHDNCGGGSAGWFLDWVEIDAQSVGQKLRFPCGRWLDKGEDD
GAIVRNLFPNPLQSEFYTPFVPYEIKTFTSDVFGAGTDADVFIVLYGRDGVCTQQKSLCV
NKRERRMYFERGAEDMFIVELEDVGDVIEKIRIGHDNRGVNPGWHLDRVEIRRLLRKGKG
SETVIFPCERWLAKSEDDGETVRELQPSDIITEKLSRDGSLKVTEVEVEDALETHTYNVS
VMTGDVSGAGTDANVFLTIYGDLGDTGERKLSKSETNSNKFERGSVDKFTIEAVDLGQVF
KIKIRHDNSMMSPDWYLDQVEVFDLDTEEVYLFLCERWLSRKREDRLIKRVFYVKDYEGV
RESLNSKKTSALTVNSVDSNMNKKNKKKREDEEEEELPIIPYHVSIGTGPERDASTASRA
YVIIVGVNHTQTERLWLDLPNGRKGFLAGSLESFEAHGSDVGEIRKVELGHDGATPESCW
LVDELAVAVPTKGVKYIFACKCWLAKDRGDGLTARVFNVLDAEAIAISQKVIYELTVVTG
DVQNAGTDTKIFMSVFGANGSTEEILLRKNEDRFERGQEDTFNMEIDDIAPLKKMRLRID
GSGSRPDWFLDKVIMRDLSTEEVYVFTYEEWLSRTRGPKRTMICEMPAVVDDEVMVELTT
YIIQVKTSDVSGAGTDANVWVIVFGENGDTGRLALKESTKSNKFERKQVDMFRFPDILSL
GDLSKVRVWHDNTGIAPGWHLEHIDVKDEFLDKTFRFPCDRWLSKKDDDGQIMRELACAN
NDYLDLNEKTKYEICVTTGDTDETKENAWIVLEGKKCRSKELVMENSSKKKRFLRGNVDR
FEFSSKNVGDIAAICLGHTPKDGKKVKGEAYWHVEEVVVTEKELGNKYIFRCNALIPLSP
KRDEFLTFECTKTVESFASKARSLVPVKYEIIIITGDEKGAGTDANVFITIYGSNGDSGS
RQLRQRLRNLFERGQTDRFVVEMLDMGDLQRVRVEHDNSGLCPGWLLDRVEITNTANGVT
TIFLCGKWLDTNRADGQIARVLYPKY
NT seq
7281 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgaaacagaaaaaatccacagctttggaagaaaccgaagaggttgatgacgaa
gtggaggaaacggagccaaatttaaaggagagtggccaggggttgacccatggagacgcc
acgaaaagaggaaagagtcggaggaaacacaagagcacagaacgctccgagacccaggag
ccgccagagaaagagaagaaggagaaagaaggagataaggtgaaaaagaagaaaaagaaa
ccaaatgatgatgctgaccctgaagctgatgctacagtttcaagtaaggatgctgagggt
gagcagaacaacaatgaggccacaaccaaacccagaaaggacaaatctgagcggcttaaa
gaggaagtgactgaggggaagaagaagcagaaaaaaaagtcgtccgtagagattccagag
ggagaggaggagatggggtccaaggacaaaaagtccaaaaatggcaagaagaagaagaag
aagtctcatgatgatgacggtgaggagcccttgattgaggaagacgaagaggaagaggaa
gactcgaagaaaaagaaaaagaagaaggccaagaagagctctggagacagcgatgatgat
aaaaagaaaaaagggaaaaaatccaaaagcaaacaggtggattatgccttgatctaccag
aacgagctgttcaactaccacacagactcttcagatggatatgaagatgagtactacaaa
aagaaagtatatgaggtggttacagtcacaggtgatgtaaagggagctgggactgatgcc
aatgtttttgttaccctctttggagactttggcgtctcacccaaggttcacttggcaagc
aacacagaaaagagaagccggaatgcatttgagaagaataagacggatgttttccgcatc
aaaacacaaaacattggcccaattaaaaagctaagaattgaacatgacaacacaggaatg
agcgccagctggttcttggacagggtggtggtgaccgacatgatccggccccatctgcgc
ttctatttcccctgcaacaattggctgagccgggaggagggtgacaacctgttcgtcagg
gatctcctgggcagtctaaaccccatggatgtcccaaaattaaataaatatcttgtgagt
gttttcactgctgatatgaagggaagtgggactgatgccgatgtcttcctgaatatcttt
ggagaacatggtgacacaggggaaagaagactggatagtgacaaagacaactttgaacgt
ggttcagaggacaagtttacaatagaggctccaaacctgggaaggcttagaaaaatcacc
atcggccacaacaacagaggttcctcagccggatggtttctagacaaggttatgatagat
gatatggggaataaagaaatatatgaatttccagtgaatcgctggtttgccatggatgaa
gatgatggcaaaatacagagagacgtcttggttggatcaatgcaaccaatggggattata
tacaatgttcaagtaatgactggtgatatcaggggagcaggaaccaactccaagatccac
atggttatgcatggttccaagggcttaaaaaacagtggcaaaattttcctcgagggtggt
gcctttgagagagctctcattgacactttcaatgtagagatctgtgaactgatcagccct
ctcagcagggtcaccattggtcatgacaacggtgccgttggtgcagggtggtactgtgaa
aaggtggtgatatactgcccattcactggcattgagcaaacatttccatgtgggatgtgg
ctagatgaggacgaaggagacggacttattgagagggaactgtatgagatggtctctctc
agacagaaaaaacagaaaaagtacccatggtccttgtggatttggacctcagacataaaa
ggcgcaggcacagatgcccaagtatttctgcagatttatggagagaaaggaaagtcagat
gagatcaaactggaaaacaattcagatagctttgaacaaggacagcttgacaaattcatg
attgaaatgccggacatgggaagattgttaaaattgcggatctggcatgagaagcgaaat
ccctttgctggctggcatttagcgaaggtcactttgctcaagacactaaccatggacaag
tattcttttgagtgtggccgctggctggacatcaatgaagatgacaatgagattgtcaga
gaacttcccgccacaggagcactcaatgatgaaccgctgcccttgataaagtatcgggtc
acaatctgcactggcaatgtcagtggtagtggtaccgatgccagcgtgttcctcaatgtt
attggagacttgggtgacacaggagagcgactcatgtttatgagcaaaaacaatgttaac
aaatttgaaaagggaaatcatgatgagttcctcatcgagtcagtcttcctgggtcaggtg
cggagagtcagagtaggtcatgacggccgtggtggaggctgtggttggtatcttgataag
gtgttggtcagagaggagggacagcctgagtcctctgccactgagttcccatgtttcagg
tggctagatcgcaatgaagatgacgggcagattatccgtgagttggttccagctggagac
ggggtgcgtctctttaatgtcggctaccacatcgcaatcaagacaggcagtgtgaacggt
gccagttctgactccaaagtgtttgtgaagctgtacggtgaaaagggcgacactgacaaa
gtgatcctggccgtctcagacaatgacctcaggaattactttgagacggcaagaactgac
atcttcacccttgatacgtatgacatcggaaagatcaaccgtcttctgattggtcacaca
aatgaaggtttacgagccggatggtttctggacagtgtgcagatttccgtgcctgttcat
gggatgcagtatatgttcccgagccaccgctggctctgcaaagatgaagcagacggcaaa
gtggaggttgaaatctatcccagcgaggtcttggaaattgaaaaattgatcaactatgaa
ataacagtggtcactggcgatatgcgatcagccggaaccaacgccgacgtcttctgtcag
atatatggagatgaaggaaaaactgaaatcctcgccctgaaaagccgctccaacaatttt
gaacgtggcaccactgaaatcttcaagattgaagctctggatgtcgggaaaatctataaa
atccgaatcttccacgacggtaagggcattggagacggatggtttctggagatggttgac
atcaagaggctaacgatggccatggtgcagattgaggtgaaaaaagaagagacaactaaa
aaagacaagaagaaggacaagaaaaagaaaaagaaagaagaggaggaggtggagataatt
gaggagctgcaggaagtggtggagacatttactttcgcttgtagccgctggctggcccgg
gacgaagaggacggggagattgtggttgaactgctgactgactccaacgaggaattggag
atgaactcttatgaggtttatgtgtacactgggacaatgtggggtgctgggaccgatgcc
aaagtctacatcaccatttacggagagagtggtgacacaggagagcgatggctcaggaaa
tccaatcgcctgaataaatttgagaaaggacaggaggatgttttcagcctgacagcagtt
gatcttggggtcctgaagaagctcaggatccgtcatgacaacagccaggccagcgccggc
tggtttttggacagagtggaaatcatagacaccaaagatgacacaacgtatttttttcca
tgtaaacggtggcttgctgttgatgaagatgattgccagcttgccagagagctggtccct
gtggatgaagccttcatgaagaagggagatgaagatgaagacgactccgaagcaaccctt
ggcttggaacagaaggccatgtcaacaacatacacagtgaggataaaaaccggtgacaag
aaatatgcagggacagatgcgaatgtcttcatgaccctttttggtaccaaggatgacaca
ggtataattactctaaaggcctcaaagacgcatagaaacaagtttgagaaaggcatgatt
gatgaatttacagtggaagctgttgacctgggacccttgagaaagctacgtattggacat
gacaactgcggaggagggtctgcagggtggttcctcgattgggtggagatcgatgcccaa
tctgtagggcagaagttacgctttccgtgcggccgctggttggacaaaggagaagatgat
ggggcgattgtcaggaatctctttcctaaccctcttcaatcagagttttacacaccattt
gttccgtacgagattaaaaccttcaccagcgatgttttcggtgctgggacagacgccgac
gtctttattgttctgtatggaagagacggagtgtgcactcagcagaagtctctgtgtgtc
aacaagagggaaaggagaatgtactttgaaagaggagccgaggacatgttcattgttgaa
ttagaagatgtaggggacgtaattgagaagatccgcatcggccatgacaaccggggggtc
aacccaggctggcatctggacagagtggagattagacgcctgctcaggaagggaaagggc
tcagaaaccgtcatcttcccatgtgagcgctggcttgccaagtcagaagatgatggagaa
acagtgcgagagctgcagccctctgacatcatcaccgagaagctttccagagacggcagc
ctgaaagtgactgaggtggaagtggaagatgccctggagactcacacatacaacgtgtca
gtaatgacaggtgatgtaagcggtgctggaactgacgctaacgtcttcctcacgatttac
ggagacctgggggacactggggagagaaaactgagcaagtcggaaacgaacagtaacaag
tttgaacggggatctgtggataagttcacgattgaagccgtggacctcgggcaggttttt
aagataaaaatccgccatgataacagcatgatgagtcctgactggtacttggaccaagtg
gaggtgttcgatctcgacacagaagaggtctacctgttcttatgcgagcgctggctttcc
aggaagagggaggacagactcatcaaaagggttttctatgtcaaggattatgaaggtgtc
agagagagcctaaacagtaaaaagacctcagccttgacagtgaacagtgttgatagtaac
atgaacaaaaagaacaagaagaaaagggaggacgaagaagaagaagagctaccgatcata
ccataccacgtctccatcggcactgggccggagcgggatgccagcaccgccagcagggca
tatgtaatcatcgttggggtcaatcacacccaaacggagaggctgtggcttgatcttcct
aacgggaggaagggctttctggctggctccttagagagcttcgaggcccacggttcagac
gtgggggagattagaaaggtggagctcggccatgatggggccactccagagagctgctgg
ctagttgatgagctggccgttgctgtgccaaccaaaggggtcaaatatatctttgcttgc
aagtgctggctggccaaagatcgaggggatggcttgactgccagagtattcaatgtgtta
gatgcagaggccattgctatctcccagaaggttatctatgagttgacggtagtaaccgga
gatgtgcagaatgcaggaaccgacaccaagatcttcatgtctgtgtttggtgccaacggc
agcacagaagagattctgctgcggaaaaacgaggacaggtttgagcgtggtcaggaagac
actttcaacatggagatcgatgacatagccccactcaagaaaatgaggctccgtattgac
ggctccggcagcagacccgactggtttctcgacaaggtgatcatgcgtgacctgagcaca
gaggaggtgtatgtgtttacctacgaggagtggctgtccaggacccgcgggcccaagagg
accatgatctgtgagatgcctgctgtggtggacgatgaggtgatggtggagctcaccacc
tacatcatccaggtcaagacgagcgatgtttcaggggcgggcaccgacgccaacgtgtgg
gtcatcgttttcggagagaacggtgacacggggaggctggcgctgaaggagtccacgaag
tccaacaagtttgaacgtaagcaggtggacatgtttcgcttccccgatatcctcagcctg
ggagacctctccaaagtcagagtttggcacgacaacacaggtattgctccaggttggcac
ttggagcacattgatgtgaaggatgagttcctggacaaaaccttccgttttccttgtgac
cgctggctttccaagaaagacgatgatggacagataatgagagagctggcctgtgcaaac
aatgattatttagacctcaacgagaaaacaaagtatgaaatttgcgtcacaaccggagac
acagacgaaaccaaagagaatgcctggatagtactggaggggaagaagtgcagatcaaaa
gaacttgtaatggagaactcttcaaagaagaagaggtttttgaggggaaatgttgacaga
tttgagttttcctcaaagaatgtgggtgatattgctgccatctgcctgggccacacgccc
aaagatgggaagaaagtgaaaggagaggcttactggcatgtcgaggaggtagttgtgact
gaaaaggagcttggaaacaagtacatcttccgctgcaatgcccttatccctctctctccg
aagagggatgaattcctgacctttgagtgcacaaagaccgttgagagcttcgcaagcaaa
gctcgaagcctggtgcccgtcaagtatgagatcatcataatcacaggcgacgagaaggga
gcgggaacagatgccaatgttttcatcacaatctacggctccaacggagattcaggcagt
cggcaactgcggcagaggctacgtaatctctttgaacgggggcagactgatcgctttgtg
gtggaaatgctggacatgggcgatctgcagagagttcgagtggagcacgacaactcagga
ctctgccctggctggttgcttgacagggtggaaatcaccaacacagccaatggcgtcacc
acaattttcctttgtgggaagtggctggatacgaacagagcagacggacagattgccagg
gtgctctacccaaagtactga
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