Xiphophorus hellerii (green swordtail): 116734319
Help
Entry
116734319 CDS
T07363
Symbol
hdac2
Name
(RefSeq) LOW QUALITY PROTEIN: histone deacetylase 2
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03082
ATP-dependent chromatin remodeling
xhe03083
Polycomb repressive complex
xhe04110
Cell cycle
xhe04330
Notch signaling pathway
xhe04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116734319 (hdac2)
03083 Polycomb repressive complex
116734319 (hdac2)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116734319 (hdac2)
04350 TGF-beta signaling pathway
116734319 (hdac2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
116734319 (hdac2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116734319 (hdac2)
Enzymes [BR:
xhe01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
116734319 (hdac2)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
116734319 (hdac2)
HDAC complexes
Sin3A-HDAC complex
116734319 (hdac2)
BRAF-HDAC complex
116734319 (hdac2)
REST complex
116734319 (hdac2)
SHIP complex
116734319 (hdac2)
MiDAC complex
116734319 (hdac2)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
116734319 (hdac2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
116734319 (hdac2)
Chromatin remodeling factors
NuRD complex
116734319 (hdac2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
116734319
NCBI-ProteinID:
XP_032441532
LinkDB
All DBs
Position
15:complement(24274176..24283547)
Genome browser
AA seq
490 aa
AA seq
DB search
MAYTTAGGTKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEVYRPHK
ATADEMTKYHSDDYIKFLRSIRPDNMSEFSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSA
AGSVKLNRQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIH
HGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYG
QIFKPVMAKVMEMYRPSAVVLQCGADSLSGDRLGCFNLTIRGHAKCVEYIKSFNLPLLML
GGGGYTIRNVARCWTYETAVALDTDIPDELPYNDYFEYFGPDFKLHISPSNMTNQNTMEY
MDKIKQRLFENLRMLPHAPGVQMQAIPEDAVPEDTVDEDTEDPDKRLSIRATDKRIACDE
EFSDSEDEXGQGGRRNTANHKKSAKRPKVDEEKESEEKKADVKEEDKTKDSGSEKVESKG
TVKTEQTSST
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggcttacaccacagcaggtgggaccaagaagaaggtctgctactactacgacggtgac
ataggaaattattactacggacaaggtcatcccatgaagccgcaccgcatccggatgacc
cacaaccttcttctgaactacgggctgtacagaaagatggaggtctatcgaccacacaaa
gccactgcagatgagatgaccaagtaccacagtgacgactacatcaagttcctcagatcc
atccggccggacaacatgtctgagttcagcaagcagatgcagcgattcaacgttggggag
gactgccctgtgtttgacggcttgtttgagttctgccagctgtctgcagggggctctgct
gctggctcggtgaagttgaaccggcagcagacggacattgcagtgaactgggccggagga
ctgcaccacgccaagaagtctgaagcttcaggcttctgctacgtcaatgacattgtgttg
gccatcttggagctgctcaagtaccaccagagggtgctctacattgatattgacatccat
catggcgatggagtagaggaggcattctacaccacagacagagtcatgaccgtgtccttt
cataaatacggggagtacttccctggaaccggagacctcagggacatcggagctggaaaa
ggcaaatattacgctgtcaacttcccactgagggacggcatcgacgacgagtcctacggg
caaatcttcaaacctgtgatggccaaggtgatggagatgtaccggcccagcgccgtggtg
ctccagtgtggcgccgactctctgtctggagaccgcctcggctgcttcaacctcaccatc
cgaggtcacgccaagtgtgtggagtacattaagtcgtttaacctcccactgctgatgctg
ggtggaggaggatacacgatccggaatgtggctcgctgctggacctatgagacggctgtc
gctctggatacagacatccctgatgaacttccatacaatgactattttgagtactttgga
cctgacttcaagctgcacatcagcccctccaacatgacaaaccagaacacaatggagtac
atggacaagatcaaacagcggctgtttgagaacctgcggatgctgcctcacgcccctggg
gtccagatgcaggccatcccagaggacgctgtcccagaggacacggtggacgaggacact
gaggaccctgacaaacgcttgtccattcgtgccacagataagaggatagcctgtgatgaa
gagttctctgactctgaggatgagnngggacagggcggcaggaggaacacagccaatcac
aagaagagcgccaaaagaccaaaagtggacgaggagaaggaaagcgaggagaagaaagca
gatgtgaaagaagaggataagacaaaagacagcggctcagaaaaggttgaatccaaagga
acggtgaagaccgagcagaccagcagcacctga
DBGET
integrated database retrieval system
