Xanthomonas hortorum: XJ27_08955
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Entry
XJ27_08955 CDS
T05082
Name
(GenBank) RNA polymerase subunit sigma-70
Organism
xhr
Xanthomonas hortorum
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_30
Phage_antitermQ
GcrA
HTH_23
HTH_50
HTH_AsnC-type
UPF0175
Fas1-AflB-like_hel
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ASW46072
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Position
2080928..2082121
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AA seq
397 aa
AA seq
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MHTDTLDLMLQRELPHAAAGCQQAYGRIVRACQNTVTAIALAITRDIAASEDIAQEAFLR
AWQRLAQLSQPASFLPWLRQITRNLARDWLRANRHRALSGEAADLAIAMAADPAPSPAEH
LLQVEEEIAALDIISALPEESRETLLLYYREGQSSQQVASLLGLSDAAVRKRLSRARASV
REELLRRFGAFARGSAPSVAFATAVTSATMLAAPGTASAAIVLGGIGGAGKLGMGGLTSS
ALSGGGAAGALSVWFGMSAVFAAGSVLVAALGTYWSCWYLLRFAETAGEVAAIRRFIRIS
TMTAALVCCSTLLLDRLDVTAWAPLLALCTGMLVVNYQSIVVLTRVMRPMLARDARKRGA
VRAPLVYRCLFSPTAVLVSTAAAVLPVLHHYMSRGML
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccgacacgctggacctgatgttgcaacgcgaattgccgcatgccgcggccggc
tgccagcaggcgtatggccgcatcgtgcgcgcctgccagaacacggtgaccgccatcgcg
ctggcgatcacccgtgatatcgccgccagcgaagacattgcccaggaggccttcctgcgc
gcctggcagcggctggcgcaactcagccaaccggccagctttctgccgtggctgcggcag
atcacccgtaacctggcgcgcgactggctgcgcgccaaccggcaccgcgcgctcagcggc
gaagcagccgacctcgccatcgcgatggcagccgacccagcaccctcgcccgccgagcac
ctgctgcaggtggaagaagaaattgccgcgctcgacatcatttccgcattgcccgaagaa
agccgcgagacgctgctgctgtattaccgcgaaggccagagttcgcagcaggtggcctcg
ctgctcggcctcagcgatgccgccgtgcgcaagcgcctgtcgcgggcacgtgccagcgtg
cgcgaggaactgctgcgccggttcggcgcgttcgcgcgtggcagcgcacccagtgtggcg
tttgccactgcggtgacctcggcaacgatgctggcagccccgggaaccgcgagtgcagcc
atcgtgttgggcggcatcggtggcgcgggcaagctgggcatgggtggcttgaccagctcc
gcgctcagcggtggcggtgctgccggtgcgctgagcgtctggttcggcatgtcggcggtg
tttgctgcgggcagcgtgctggttgccgcacttggcacgtactggtcgtgttggtacttg
cttcgctttgccgagaccgctggcgaggttgcggcaatccgtcgcttcatccgcatcagc
accatgacggctgcgctggtgtgctgcagcacactgctgctggaccggctcgatgtcacc
gcatgggcaccgttgctggcgctatgcactgggatgctggtggtgaattaccaatccatc
gtggtgctgacgcgtgtcatgcggccgatgctggcacgcgacgcgcgcaaacgcggcgct
gtgcgggcaccgttggtgtaccgctgcctgttcagtccgaccgcagtgctcgtcagcacc
gccgcagcggttctgccggtcttacatcactacatgtcgcggggaatgctttga
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