Xenopus laevis (African clawed frog): 100037019
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Entry
100037019 CDS
T01010
Symbol
rnf38.L
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38 isoform X5
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
100037019 (rnf38.L)
Enzymes [BR:
xla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100037019 (rnf38.L)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100037019 (rnf38.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
zf-RING_16
zf-C3H2C3
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
100037019
NCBI-ProteinID:
XP_018112034
Xenbase:
XB-GENE-1015613
UniProt:
A0A8J0UXU6
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All DBs
Position
1L:119434171..119582649
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AA seq
464 aa
AA seq
DB search
MYCNEDSPSPKRQRLSNSVFEYAAASPTPSPPMRPWEMTSNRRPPSARPNQHHFSGERCN
TPARNRRSPPVRRQRGRRDRLARHNSISQDENYHHLSYGQQQAVEEPRAFHPPNVSPRML
HPAAHPPQQNAVMVDIHEQIHQGTVPVSYTVTTVAPHGIPLCTGQHIPACSTQQVPGCSV
VFSGQHLPVCSVPPPMIQACSVQHLPVPYAAFPPLISSDPFLLHPPHLSPHHHAHLPPPG
QFVPFQTQQSRSPLQRIENEVELLGEHLPVGGFTYPPSAHAATLQPSAPLQFITHDPLHQ
EVSFGVPYPQFMPRRITGRNRYRSQQPMPPPPYHPSLLPYVLSMLPVPPTVGPAFSFELD
VEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFE
SRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtactgtaacgaagacagtcccagccccaagcgacagcggctatctaattcagttttt
gaatacgctgcagcatcgcctaccccatctcccccaatgcgaccatgggagatgacatca
aataggcggcctccttcggctcggcctaaccagcaccacttctcaggggaaagatgcaac
actcccgcacggaacagaagaagcccacctgtgaggcgtcagagagggagaagggacaga
ctggctcgtcacaactccattagccaagatgaaaattatcaccatctctcttatgggcaa
cagcaagcagtagaagagcctcgagccttccacccaccgaatgtatcccctcgcatgctc
catccagctgcacatcctccacagcaaaatgctgtaatggtagacattcatgagcagatt
caccagggcacagtaccggtctcctacacagtcacaacagttgcaccacatgggattcca
ctttgtacaggacagcacatccctgcttgtagtacacagcaagttcctgggtgttcagtg
gtctttagtggccagcacttaccagtctgcagtgtgcctccacctatgattcaggcctgt
tcagttcagcatttaccagtaccctatgctgctttcccacccctcatttcaagtgatccg
tttcttttgcatccaccccacctttccccacatcaccacgctcaccttccgcctcctggt
cagtttgttccctttcagacacagcagtcacgttcgcctctgcaaaggatagagaatgaa
gtggagttgcttggagagcatctacctgtaggtgggtttacgtaccctccatctgcccat
gctgcaacactgcaaccgtctgccccactacagttcataactcatgatcctttgcaccag
gaagtttcatttggtgttccttatccccaatttatgcctcgaagaataactggacgaaac
cgataccgatcacaacaaccaatgccaccaccaccttatcatccaagtcttttaccctat
gtactgtcaatgcttccagtgcctcctaccgttggacctgcctttagctttgagttggat
gttgaagatggggaggtggaaaactatgaggcattgctgaatcttgcagaaagactgggt
gaagccaaaccacggggactaacaaaagcagacattgaacaacttccatcctataggttt
aacccaaacaatcaccagtctgagcagacattatgtgtagtatgcatgtgtgattttgag
tcaagacaacttcttagagtcctgccgtgcaaccatgaatttcatgccaagtgtgtcgac
aaatggcttaaggcaaatcgtacttgtcctatttgtcgggcagatgcttcagaagtgcac
cgtgattccgaatga
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integrated database retrieval system