Xenopus laevis (African clawed frog): 100462927
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Entry
100462927 CDS
T01010
Gene name
cacna1e.L, ca(v)2.3, cacna1e, cav2.3
Definition
(RefSeq) calcium channel, voltage-dependent, R type, alpha 1E subunit L homeolog
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04010
MAPK signaling pathway
xla04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100462927 (cacna1e.L)
04020 Calcium signaling pathway
100462927 (cacna1e.L)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xla04040
]
100462927 (cacna1e.L)
Ion channels [BR:
xla04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
100462927 (cacna1e.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
100462927
NCBI-ProteinID:
XP_018113997
Xenbase:
XB-GENE-6492359
LinkDB
All DBs
Position
4L
AA seq
2164 aa
AA seq
DB search
MFLLYQFQCIFLNYCLTPFEYMILATIIANCIVLALEQHLPGDDKTPMSRRLEKTEPYFI
GIFCFEAGIKIVALGLVFHKGSYLRNGWNVMDFIVVLSGILATAGTHFNTHVDLRTLRAV
RVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYSGKLHKACY
RNNSGMELEPMDPPHPCGVPRCPTGYECKEWIGPNDGITQFDNILFAVLTVFQCITMEGW
TTVLYNTNDALGATWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFMKLR
RNQQIERELNGYRAWIDKAEEVMLAEENKNSGTSALEVLRRATIKRSRTEAINRDSSEDH
CVDISSVGTPLARASIKSAKMDGASYFRHKERLLRVSVRHMIKSQVFYWMVLGVVALNTF
CVAIVHHNQTLWLSNVLYYAEFLFLGLFLVEIAFKMYGMGPRLYFHSSFNCFDCGVTLGS
IFEVLWAIFRPGTSFGISVLRALRLLRIFKITKYWSSLRNLVVSLMNSMKSIISLLFLLF
LFIVVFALLGMQLYGGRFNFNDGTPSANFDTFPAAIMTVFQILTGEDWNEVMYNGIRSQG
GVRSGMWSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEEEEAFNQKHALQK
AKEVSPMSAPNASSIEKDRRKRNTLSIWEQRTSQLRRHIQMSSQEAIQSEELTALNPHSS
IYRKSKEADEQKTEKEEGDQDVKLVITPVEGPPEGEGSPSNRNLREHWRQKSRHGNAENT
EPNGTTPEEALRRRQSQRRSRHKRVRTEGREQCSNPNSTSASREGGLDKVTVEDGRTIPE
EKSNEEAKEVRGVDDEPLKICISSRNPQDRNNKTLGCEGIALNDTPLKDVNNHEKDSSPP
DLDCSEQALLGSIRSQESPNPTSCSLPDVSSSTERVTESTVITLPDTGVPADCTVVQMSE
GRDGEVNFRSSQQEKIEEDTEDGEERTIKRKEKLLESPKAIVPYSSMLIFSSTNPIRKVC
HYIVNLRYFEMSILLVIAASSIALAAEDPVLTNSDRNKVLRYFDYVFTGVFTFEMIIKMI
DQGLILHEGSYFRDLWNILDFVVVVGALIAFALANVLGTNKGRDIKTIKSLRVLRVLRPL
KTIKRLPKLKAVFDCVVNSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYCTDSSKETE
KECIGSYIDHEKNKMEVKRREWKRHDFHYDNIIWALLTLFTVSTGEGWPQVLQHSVDITE
EDRGPSRSNRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSLEKNERAC
IDFAISAKPLTRYMPQNRHTFQYRVWHFVVSPSFEYTIMAMIALNTVVLMMKYYSAPYTY
ELALKYLNIAFTMLFSLECILKIIAFGFLNYFRDTWNIFDFITVIGSITEIILTDTKLVN
TSSFNMSFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGM
QVFGNIRLEEDSHINRHNNFRSFFSSLMLLFRSATGEAWQEIMLSCLSDKRCEPDTSATS
GHNENERCGTELAYVYFVSFIFFCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVR
IWAEYDRAACGRIPYKDMYKLVRVISPPLGLGENCPYRVACKRLVLMNMPVSEDMTVHFT
STLMALIRTALDIKIAKGGADRHLLDSELQKETLAIWPNLSQKMLDLLVPMPKASDLTVG
KIYAAMMIMDYYKQSKAKKQRQQLEEQKNAPMFQRMEASALPEEILSNAKALPYLEQDTV
SGLGGFPSLSPLSPEEVFQPPCLDRDDEDFEEQLSLEPEVREFSREQLPNRGSYIPVEML
ERPASVRASSMPRLAENPQVLSDVSSMRRSFSTTAEKRARSSWLDEFTMDRSSTDCAYRY
QRRSYHASIRLSANRLNTDTGHWSDNHRSGGRERGRSKERKHLLSPDPSRCNSEERIPQA
ACEHRDHQLSPGHTPCSVQILDSLSESCTPSDTSTPRQGRRQLPSVPPTPRPLISFSSLI
RQQKQSPHPQNNNDIILPSEPGLSESSCSLGGHQSSQSTPQHYISEPYLALHEEMQSSDC
PTEDTLTFEVAVATSLGRSNTIAAAPLRHGWQMPNGHYRRRRKGGIPPVIPSRELSDTEE
DDRC
NT seq
6495 nt
NT seq
+upstream
nt +downstream
nt
atgtttttgttatatcaatttcagtgtattttccttaattattgtctcactccttttgag
tacatgatccttgccacaattattgcaaactgcattgtcctggctttggagcagcatctt
ccaggggatgacaagactccaatgtctcgcagattggaaaagactgagccctacttcatt
ggaatattttgctttgaagctgggattaaaattgtcgctctggggctggtttttcacaaa
ggttcttatctccggaatggctggaatgtcatggactttatagtagtgctcagtggcatc
ctggccacagctggaactcacttcaacactcatgtggacctgcgtactttacgggcagtg
cgtgttctcaggccactgaaactggtctcggggattcctagtttacagattgtgttgaag
tcaatcatgaaggcgatggttcctctgctacagattggattgttgcttttctttgccatc
cttatgtttgctatcatcggccttgagttttacagtggaaagctgcacaaggcctgttac
aggaacaactctggaatggagctggagcccatggacccacctcatccttgtggagtgccc
cgttgcccaactgggtacgagtgcaaggaatggattggacccaatgatggaataacacag
tttgacaacatcctatttgcagtgctgacagtcttccagtgtataactatggagggctgg
accacagtgctgtacaataccaatgatgccttaggagccacgtggaactggctgtacttc
attcccctcattatcatcggatccttctttgtccttaatcttgtcctcggagtgctgtct
ggtgaatttgccaaagagagggagagagtggaaaaccgtcgggctttcatgaagttgcgt
aggaatcagcagattgaaagggagctgaatggttatcgagcatggatagataaagctgag
gaagttatgttggccgaagaaaataaaaattcagggacctctgctttagaagttcttaga
cgagcgaccattaaaagaagtagaacagaagccatcaaccgggactctagcgaggaccac
tgtgttgacatatcgtctgttggcaccccccttgctagagcaagcatcaagagtgccaaa
atggatggggcatcatattttcgtcacaaagaacgactattgcgtgtctctgttcgtcac
atgatcaaatcccaggttttctactggatggtcctgggagtggtagcacttaacactttc
tgtgtggctattgtccaccacaaccagaccctgtggctctcaaatgtcctttactatgca
gaatttctgtttcttggattatttttggtggagatagcttttaaaatgtatggaatgggc
ccacgtctttactttcactcctccttcaactgctttgattgtggggtcacattaggtagt
atatttgaagtactttgggccatctttagaccagggacttcctttggaatcagtgtccta
agagctctccgacttttgagaatctttaaaataacaaaatactggtcctcactaaggaac
ctggtagtctccctgatgaattctatgaagtccatcatcagcctgctcttccttctattc
ctcttcatagttgtttttgccctcctaggaatgcagctatatggtggcagattcaatttt
aatgatggcactccatctgcaaactttgatactttccccgcagccatcatgactgtattc
cagattttgacaggagaggattggaatgaagtgatgtacaatggtattcgctcccagggt
ggtgttcgatccggaatgtggtcttccatatactttattgtccttaccctctttggaaat
tacactctgctaaatgtatttcttgccattgctgtggacaaccttgctaatgcacaagag
ttaactaaggatgagcaagaagaagaggaagctttcaatcagaagcatgcactgcaaaaa
gccaaggaggtcagccccatgtctgcgcctaacgcatcgagtattgagaaggatcgcaga
aaacggaacacattgtctatatgggaacagcgcacaagtcagctaaggaggcacatacag
atgtctagtcaagaagctattcagagtgaagaactgacagctctaaatccacactccagt
atctatcgcaagtcaaaggaagctgatgaacaaaaaacagaaaaagaagaaggggatcaa
gatgtaaaactggttataaccccagtggaaggaccaccagaaggagaaggaagcccttct
aatagaaatctcagggaacactggcggcagaaatccaggcatggaaatgctgaaaacact
gagccaaatggaacaactccagaggaagcactgcgccgtagacaaagtcagagacgcagc
cgtcataaaagagttagaactgaaggtcgtgagcagtgtagcaatccaaacagcacctca
gcaagcagagaaggtggtcttgataaagtgaccgtagaggatggaagaacaattccagaa
gagaagagcaatgaagaagccaaagaagtcagaggggtggatgatgagcctcttaagatt
tgcatatcctcaagaaatcctcaagacagaaataacaagactttgggttgtgagggtatt
gccttgaatgatactcccctgaaggatgtgaacaaccatgagaaggacagtagccctcct
gatttggattgcagtgagcaggctctgctgggcagcattcggagccaggaaagccctaat
ccaaccagctgcagtttgccagatgtgtccagcagcaccgagcgcgtcactgagagcaca
gtcattaccttaccagatactggagtgcctgccgactgcaccgtggtacagatgagtgaa
ggaagggatggagaagtcaactttagatcttcacagcaagaaaaaatagaggaggacact
gaggatggagaagaaagaactataaaacgaaaagagaaattgttggagtcccccaaagcc
attgtaccgtacagttcaatgctcatcttcagctccaccaatcccataagaaaagtatgc
cattacattgttaatctacgatactttgagatgagcatcctgctggtaatagcagcgagt
agcattgccttagcagcggaggatcctgttctgaccaactcagaccgcaacaaagttctt
cgctattttgactatgtttttacaggagtcttcacttttgagatgattataaagatgatc
gaccaaggtttgattttacacgagggctcctactttcgtgacctctggaacatcttggat
tttgtggtggttgtgggagccttaattgcctttgccttagccaatgttttggggactaac
aaaggacgggacatcaaaactattaagtctctacgtgtgttacgggtgctgcgtccacta
aagaccatcaaacgcctgccaaaactgaaggcagtctttgattgtgtggttaactcttta
aagaacgtctttaatattctgatcgtatacaaactcttcatgttcatatttgctgtcatt
gctgtgcagctgtttaagggcaagttcttctactgtacagacagctcaaaggaaacagag
aaagagtgcatagggagctacatagatcatgaaaagaacaagatggaggtgaagcgaagg
gaatggaaaagacacgatttccattatgacaacattatatgggctcttcttaccctcttt
actgtatcaacaggagagggttggcctcaggttctgcagcactccgttgatataacagaa
gaagataggggtccaagtcgaagcaaccgcatggagatgtccattttctatgttgtctac
tttgtggtcttccccttcttctttgtaaatatatttgtggctctgattatcatcacattc
caggagcaaggagacaagatgatggaggagtgttccctagagaagaatgagagagcctgc
atagactttgcaatcagtgccaagccgcttacaagatacatgccacagaacagacacaca
ttccagtaccgggtctggcactttgtggtctccccttcatttgaatataccattatggct
atgattgcactaaacacagtggtacttatgatgaagtattattccgcgccatacacatat
gagcttgcattaaagtatctgaacattgcattcacaatgctcttttctctggagtgcatc
ctcaaaatcattgcatttgggtttttgaattactttcgggatacgtggaacatttttgac
ttcattactgtaattggtagcatcacggaaatcattttaacagacactaagttggtaaac
acgagcagctttaatatgagctttctgaagctgttccgagccgcacgacttattaaactt
ctccggcaagggtacaccatccggatcctgttgtggacttttgttcagtcctttaaggca
cttccttatgtgtgtctcctcattgcaatgttgttcttcatctatgctatcatcgggatg
caggtgtttggcaatatccgcctggaagaggacagccatattaataggcacaacaatttc
agaagtttctttagttctcttatgttactcttcaggagtgccacaggagaggcttggcag
gagatcatgctttcatgccttagtgataagcgttgtgaaccagacaccagtgcaacttct
ggacacaatgagaatgagcgctgtggaactgaacttgcatatgtttattttgtttcattc
attttcttctgctccttccttatgctaaatctgtttgtggctgtcattatggacaacttt
gaatacttgacacgggactcctccattttgggacctcatcacttggatgagtttgttcgg
atatgggctgaatatgatcgagcagcatgtggcaggatcccctataaggatatgtacaaa
ttagtccgagtcatctcgcctccgctcggcctaggagagaactgcccatacagggtggca
tgcaagagactggtcctgatgaatatgccagtgtcggaggacatgacggtacatttcaca
tcaactcttatggccctaatacgcacagcattggatatcaaaatagccaaaggaggcgct
gacaggcacctgctggactctgagctgcagaaagaaacacttgccatttggccaaatctc
tcccagaaaatgctggacttacttgtgccaatgccaaaagcctctgatctgacagttggg
aagatttacgctgcaatgatgatcatggattattataaacagagcaaagccaaaaaacag
aggcagcagctggaggagcagaaaaatgcaccaatgttccagagaatggaggcttccgcc
ctccctgaggaaatcttatccaatgctaaagcattaccataccttgagcaagacactgta
tcaggcttgggtggattcccttcactgagtcccctgtccccagaagaggtattccagccg
ccatgcctagacagggatgatgaagactttgaagagcagctgtctctggagcctgaggtt
agagagtttagcagggagcagctccctaaccgaggcagctacatcccagtggagatgctg
gaacgtccagcgtctgtgagagcttcctccatgccacgtctggctgagaaccctcaggtc
ctgtcagacgtaagctcaatgcgtcgctccttctccacaactgcagagaagcgagcacgc
agctcgtggctagatgagttcactatggacaggagcagcacagactgtgcatacagatac
cagaggcgcagttatcatgcatctataagactgtctgcaaatcgcctgaatacagataca
ggccattggtcagataatcaccgttctggtggaagagagcgaggaaggtccaaagaaaga
aaacacctgctgtcccctgatccttctcgctgtaattctgaggaaaggatcccacaagct
gcctgtgaacaccgagatcaccaactgtcccctgggcacactccctgcagtgtacagatt
cttgactctctgagtgaaagttgcaccccttcagacaccagcaccccaagacaaggccgc
aggcagcttccctcggtgcctccaactcctagacctcttatttccttctcttcgcttatc
cgccaacagaaacagagcccccatccccaaaataataatgatattatccttccaagtgag
cctggtctgagtgagtcttcctgctcccttggcggtcaccagagctcccagtccacacca
cagcattatatctcagagccctacctggcactgcatgaggagatgcaaagctcagactgc
cccacagaggacacactcacctttgaagttgctgtggctactagtctgggccgctctaac
accattgccgctgccccactgcgtcatggctggcaaatgccaaatggtcactaccggcgt
cgaaggaagggaggcattccaccagtgataccctccagagaattaagtgacacagaagag
gatgatcgatgttaa
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integrated database retrieval system
