Xenopus laevis (African clawed frog): 108696774
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Entry
108696774 CDS
T01010
Symbol
tsen34.L
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34 isoform X1
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xla03016
]
108696774 (tsen34.L)
Enzymes [BR:
xla01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
108696774 (tsen34.L)
Transfer RNA biogenesis [BR:
xla03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
108696774 (tsen34.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
108696774
NCBI-ProteinID:
XP_018081896
Xenbase:
XB-GENE-6489134
UniProt:
A0A8J0TCF6
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All DBs
Position
7L:120892391..120901323
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AA seq
317 aa
AA seq
DB search
MSSVINENMILIQLLEGKAFVWKADDVQMIREQHGLVGNLVGALVRKPRQNSRLGLPLQL
LPEEARLLVEVGAAVLVRSLSREKELQKQEVLEPESAESSSSTNEGKDEQPEAAAYEKYL
GESYKEQRKLALEEKRRTLESLADRIAEGRSRRKRQRSDQEGDATESPLQGPIKELQNLE
ETFHFPKEAMMVHLPTARTSCEDVEEVDPRQVSVHWPYAGQKEHEVRFKVFKSLWQKGYF
LTNGSKFGGDFLVYPGDPMRFHAHFIAICYPYKEEIALSDIVTAARLGTNVKKTVLLCSA
DQEGEVTFTSLQWSGLQ
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagttataaacgagaacatgatcctgatacagctcctagaaggaaaggccttt
gtgtggaaggcagatgatgttcagatgatccgggagcaacatggactggtggggaatctg
gtgggtgccctggtgaggaaaccaaggcaaaactcaaggcttggcctcccattgcagctt
ttgcctgaagaagctcgactgttggtagaagttggagctgcagttcttgtgcgtagcctc
tcaagggaaaaggaactgcaaaaacaagaggttttggaaccggaaagtgcagagtcctcc
tcttcaacaaacgaaggtaaagatgagcagccagaggccgctgcctatgagaagtatctg
ggtgaaagctacaaggagcagaggaaactcgcactggaagagaaaaggcgcacactagaa
agcctagcagatcgcattgcagagggaaggtcacggaggaaacggcagcgcagtgaccag
gaaggagatgctacagagtcacccttgcagggaccgattaaagagcttcagaacttagag
gagacattccattttcccaaggaagcaatgatggtgcatctgccgacagctcgcacttcc
tgtgaggatgtagaggaggtggatccgcgtcaggtctctgtgcactggccgtatgctggg
cagaaggagcatgaagtgcgctttaaagttttcaagagcctttggcaaaaagggtatttt
ctcacgaatggtagcaaatttggaggagatttccttgtttatccaggagaccccatgcgc
ttccatgcgcatttcattgctatctgttatccatacaaggaggagatcgctctgagtgac
attgttactgctgcacgcctcggcactaacgtcaagaagacagtgctgctttgctccgca
gaccaggaaggagaagtgactttcacctcattgcaatggtcaggcttgcaataa
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