Xenopus laevis (African clawed frog): 108714420
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Entry
108714420 CDS
T01010
Symbol
lmx1a.L
Name
(RefSeq) LIM homeobox transcription factor 1-alpha
KO
K09371
LIM homeobox transcription factor 1
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108714420 (lmx1a.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
108714420 (lmx1a.L)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
HTH_32
Motif
Other DBs
NCBI-GeneID:
108714420
NCBI-ProteinID:
XP_018114123
Xenbase:
XB-GENE-17338627
UniProt:
A0A1L8GN25
A0A974D725
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Position
4L:complement(104912882..104959848)
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AA seq
382 aa
AA seq
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MLDGLKMEENIQNVIESSAALSSLFGRTMEQKWVCEGCERVICDRFLLRINDSLWHEQCA
QCCACKERLESSCFYRDKKLYCRNDYEKLFAVKCGSCLDTIAPSEFVMRAQKNVYHLGCF
CCCVCDRQLQKGDEFVLKDGQLLCKSDYERERDLLSLVSPAASDSGKSEDEEDSGKFDDS
KGAEDGKDQKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWF
QNQRAKMKKLARRQQQQQQQQQQDQHNPSRIPSAQTHNSSSSSIEGIMNVFTTLPQQQLL
SLEQNMYSSDPFQQGLTPPQMPGDHMHPYGGESFFHDIDSDDASLNNLSECLLPGPELGP
IQGRVGNPIDRLYSMQNSYFTS
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgttggatggactgaaaatggaagaaaatatacagaacgtcattgaatcatcagcagca
ctctcctctctgttcggtcgaaccatggaacagaagtgggtatgtgagggatgcgaacgg
gtaatttgtgatcgatttctcctccgaataaatgacagtctgtggcatgaacagtgtgcc
caatgctgtgcctgcaaagagcgactggaaagcagctgtttctacagagacaaaaagctt
tactgtaggaacgactacgagaagctgtttgctgtgaaatgtggatcctgcctagatacc
atcgctcccagcgagtttgtcatgagagcgcagaaaaatgtctaccacttgggctgcttc
tgctgttgtgtctgcgatagacagctccagaagggcgatgagtttgtactgaaagacgga
cagctgctgtgcaagagtgactatgagagagaaagagacctgctcagcctggtgagccca
gcagcctctgattcaggtaaaagtgaagatgaagaagattctgggaaatttgatgacagc
aagggcgcagaggatggaaaagaccaaaaacgtcccaagaggccaagaactatcttaaca
acacagcagcgcagggcattcaaggcttcctttgaggtctcctctaaaccttgcaggaag
gtgagggagaccctagcagctgaaacaggcctcagtgtccgtgtggtacaagtctggttc
cagaatcaaagagccaagatgaaaaagctggcaaggagacagcagcaacagcagcagcag
cagcaacaagatcagcacaacccaagccgcattccctcagctcaaacacataattcaagc
agctccagcatcgaaggaatcatgaatgttttcactaccctgccacagcaacaacttctt
tccttagagcagaatatgtacagttctgacccatttcaacaaggtcttactcccccacag
atgcctggagaccacatgcacccttatggtggagaatccttttttcatgatattgacagc
gatgatgcttcccttaacaacctgagcgagtgccttctaccaggaccagaattaggacct
atccagggcagagttggaaacccaattgatcgcctttactccatgcaaaactcttatttt
acatcctga
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