Xenopus laevis (African clawed frog): 108715163
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Entry
108715163 CDS
T01010
Symbol
phrf1.S
Name
(RefSeq) PHD and RING finger domain-containing protein 1 isoform X1
KO
K17586
PHD and RING finger domain-containing protein 1
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xla01009
]
108715163 (phrf1.S)
Protein phosphatases and associated proteins [BR:
xla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108715163 (phrf1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-rbx1
zf-C3HC4_4
zf-RING_5
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
108715163
NCBI-ProteinID:
XP_018115547
Xenbase:
XB-GENE-17331640
UniProt:
A0A8J0V9T6
LinkDB
All DBs
Position
4S:complement(2553938..2591567)
Genome browser
AA seq
1791 aa
AA seq
DB search
MEDEEENQLINRNGSQGRNRQQELPASDSEEMEDSEDEFESEDGDDGEEEEEGGEDEEGT
DSEEEEEDEDEDAATESLDPTQPAGDFNEDFSSDDERENCPICLNGFRDQVVGTPENCSH
YFCLDCIVEWSKNANSCPVDRIAFSCIHIRAHFGGEILKKVPIHKKAVEEEVEEDTTNCA
VCGRCDREDRLLLCDGCDAGYHMDCLTPPLNAVPVNEWFCPECADANQPEEVSEEEVAGL
LADVVPTTSRLRPNVVRTRAIARTRQSERVRANVNRNRISTARNIQHVPRYLMSSLLDET
IEAVVAGLNTAVYQRPLTSRTTTSRRKKKVGRKKSSQSKVSKGTRGVGKKRRRRFRRRKG
KKMARKVASSHSRIARSLGICNPPRGSSLPRIQRPAEQTLGSMRHDIGAATLSVFGNSYD
LDPFDSNEDHLSNPASPLTSKRRVLSRSALRSHQPVARPISVGLSSRGGVAPQVHEALPV
AEPVPDLLGSILSGQSILMMRSSDIVISRDGSLTAMKTGDPASQKNMSREEPTADGHVEP
CSSHSGSPSVASSVDKWKPIQEQRLRFPSSDLYSLSPSPSPPPSSVPALSLPGTSAFRLK
NAFTPRVVQVQASAGRVTSKSAESFRFNGVVHKPEPPSSDNNIHAKGPSVKRPPKPPAMR
LDISEFPRIPKIKKEMDSSPSNVRGKPSDSINDSNINNSLPSGCISQLTGRGESNKLGKF
NTTESRTKNTRQESHDQSRSSAGHSSASSSTTPLYSSTSRSVGSLDVGGGGLRITISGNS
ASACRQVSPSAKAPFHSSEGKTQPKGAPPVPATSTKREKPIKNEIYDPFEPTGSDSGSRD
SSPERPGPSSQPLAATAVTTTETTSVGTSSGAKVGTFRSFRLLPSHSTKVGVSKLGPDFS
DLSPASKHQQEKDSAEELSPVLTPFIKVEKEIKNEAAKEPRIEQTPLKISCPFTGLKITS
DLTPGGTRGFHFDIEEEKNICIKAEPDTLSNRSIQQSSSSRLMWESESVSPAIPSSNSRG
LEIQRKITIKEEGKTPSSSMSRPRSRDRDSRSASLSTEDEREKKSKSKSHKAKRVRSDRS
SSGSCERSRKKRQKEKKKEKKKKSTDFKERKRSRSSSRSSSSHRMYNSKKKKKKKRGSRS
GSRGRSFSPEKDKKRKHKSEKNSNKEGDSRVKERKKSKDERAKHRSRSPPTIKEQKTHRT
KDKTSRFRDQELCKEPSRSPEREERTVTCTVSVRKDFHSVKQAARKCTLIAPKEEVEIES
TSILESDDSTPVKEDKDIELSNNDEDDDDDDESQVGNNSSPPWSPSLLDCLLPEDKPDDV
EEMQSAKDIDSPKYLLPKAEVVSPQGSPLTTDTEPPSPHSSPFTKTDELGTHPAVKTEDD
DLQWSPSHLDDFLINELSDDVGSVEAASPDDVDLEEAIMMKTSEDYEEKAVVSFSKKQVI
PFLQDDEDKVEDKVKPGSGEAANHIAEAKAKDDVSALDKSKSRSPPKSEPDLMALTKAKL
ATKRVTWNLQHKNSENTETETSPVFPLSIIEEPRPRSPKQCVPVFPKPNISASPKQSISL
LARLAAESRSQLSSPLPWNSLEKPTEDLVSKLTSHVAGNAPDRPAKEAKQLPRVTLETPV
QTFPQTLPPLPLPPIFPPYAPVSEPAVPCILQSNRTIFSPTPKPGSLATANEPKIQAAST
GKDKGKTKSSKKGEKVKNDEYMKKLHMQERAVEEVKLAIKPFYQKREITKEEYKDILRKA
VQKICHSKSGEINPVKVVNLVKAYVDKYKHVRKHKKTESLEDHGTMCDSPV
NT seq
5376 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaggaggagaaccaactaattaacagaaacggctcccaagggagaaatcgg
cagcaagagcttcctgcaagtgatagcgaagaaatggaagattcagaggatgaatttgag
agtgaagatggtgatgatggggaagaagaagaagaaggtggtgaggatgaagagggaact
gactctgaagaggaggaggaagatgaggatgaagacgctgcaacggaaagtttagatcca
acacagccggcaggggattttaatgaggactttagttccgatgatgaaagagaaaactgc
ccgatctgcctgaacggcttcagagaccaagttgttggcactcccgaaaactgcagtcat
tatttctgcctggattgcattgtggagtggtcgaagaatgcaaactcgtgccctgtggac
agaattgcattttcttgcattcacatacgagcgcactttgggggcgagatcctaaaaaag
gttcctatacacaaaaaagcagtagaggaggaggtggaggaagataccaccaactgtgcg
gtgtgtggacgatgtgaccgtgaggatcgactgctactttgtgatggctgtgatgcaggc
taccatatggactgcctcactcctcctctgaatgctgttccagtaaatgaatggttctgt
ccagaatgcgcagatgccaatcagccagaggaagtgagtgaggaggaggtggctggactg
cttgcagatgtggttcccaccactagccgtctacgtcccaatgtggttaggactcgcgct
attgctcggactaggcaaagcgaaagggtgagagccaacgtcaacagaaaccgaatcagc
actgctcgcaatatccagcatgttccaagatacctaatgtcatctctacttgatgaaacc
attgaggcagtagttgctggactaaacactgcagtctaccagagacctttaacctctcgt
actaccaccagcaggaggaaaaagaaagttggcaggaagaagagtagccagtccaaggtc
tcaaaaggaacacggggagtggggaagaagcgccgaaggaggttcaggcggaggaaaggg
aaaaaaatggctagaaaagtggcctcctctcacagtcgtattgccagatcactggggatt
tgcaacccgcctcgaggatcttcattgcctcgtattcaacgtcccgcagaacagacgctg
ggctccatgagacacgacataggagctgcaacactttctgtgtttgggaactcgtatgac
ttggacccatttgacagtaacgaggaccatttaagcaacccagcttctcctcttacctca
aagcgcagggtgctttcccgctcagccttgagatctcatcaaccagttgcccgtcctata
tctgtgggtctctcaagtaggggtggtgttgctccacaagttcatgaagctttaccagtg
gcagagcctgtgcccgacctcctagggagtatcctgtctggacagagtattctgatgatg
aggagttcagatattgttattagccgtgatgggtcgttaacagcaatgaaaacaggtgat
cctgcttcacagaaaaatatgtctagggaagagcctacagcagatggtcatgtggagcca
tgctcctctcactcagggtctccgtctgtcgcctcttcagtagataaatggaaaccaatc
caagagcagcgactcagatttccatcgtcggatctttactcactttctccatccccgtct
ccacctccatcatctgttcctgcattatctttgcctgggacttctgcctttaggttaaaa
aatgcttttacaccgagggtcgtccaggtgcaagcctcggcaggccgagtgacctccaaa
tctgcagagtcttttcgattcaatggagttgtacacaagccagagccacctagctccgat
aataatatacatgcaaagggcccaagtgtgaagcgcccacccaaacctcctgcaatgaga
ttagacatttcagaatttcccaggataccaaagatcaagaaggaaatggacagtagccct
agcaatgttcgagggaagccctcagattctataaatgactcaaatataaacaatagcctt
cccagtggctgcataagtcaactaaccggtcgtggagagagtaacaaattgggaaagttt
aacaccacagaaagcagaacgaagaacactcgtcaagagtcacatgaccagtcaagatct
agtgctggccattcgagtgcaagcagtagcactacaccgctttactccagtacctcgaga
agtgtggggtccctggatgtaggtggtggtgggcttcggataacaatcagtggaaattca
gccagtgcttgtaggcaagttagtccaagtgcaaaggccccattccattcatctgagggt
aagacacaaccaaaaggagctccccctgttccagctacttctaccaagagggaaaaacct
attaaaaatgaaatatatgacccgtttgagccaactggttcagattcaggctctcgtgat
agtagcccagaaaggcctgggccttcatctcagccattagcagccactgctgtaacaaca
acagagactactagtgtaggcacatcaagtggagccaaagtgggaacatttcgaagcttt
aggctactcccttcacactccacaaaagtgggagtctcaaagctgggaccagatttctcc
gatctctctcctgccagcaagcatcaacaagaaaaggacagtgctgaagagcttagtccc
gttttgactcctttcataaaggttgaaaaggagataaaaaatgaagctgctaaggaaccg
agaatcgaacagactcctttaaaaatctcatgtccattcactggcttgaaaattacatct
gacctgacacctggtggtactagaggatttcattttgatatagaggaagaaaaaaacatt
tgcattaaagctgagccagacacactctcaaataggagcattcaacagagttcaagcagc
aggttgatgtgggaatctgagtctgtttcaccagctattccttcatctaacagtcgagga
ttagaaatacagagaaagatcacaattaaggaggaagggaagactccctcaagctccatg
tctcggccaagatcacgtgacagagattcaagatcagcttcattgtccacagaggatgaa
agggaaaagaaatccaagtcgaaatctcacaaagcaaaaagggtacgcagtgatcggtcc
agctccggtagctgtgaacgttctagaaaaaaacgtcaaaaagaaaagaaaaaggagaaa
aagaaaaaaagcacagatttcaaggaaagaaagagatcaaggtccagtagccgcagcagc
tcttcccacagaatgtacaacagcaaaaagaagaagaaaaagaagcgggggtcccggtct
ggatccaggggccgttcttttagccctgaaaaggacaagaaacgaaagcacaagtctgag
aaaaattccaacaaagaaggggactctagagtaaaagagagaaagaaatcgaaggatgaa
agggccaaacacaggtcgaggtcgccacctacaatcaaggagcagaaaactcatcgaact
aaagataaaacttcacgtttccgagatcaggaactatgcaaagagccttcgcgttcacca
gaaagagaggaaaggactgtgacgtgtacagtaagtgttagaaaagactttcactctgtc
aagcaggcggcacgtaaatgcacattaattgcacccaaagaggaggttgaaatagaatcc
acttctattttggagagtgacgattcaacaccggttaaagaggataaagatatcgaacta
tcaaacaatgatgaggatgacgatgatgatgatgaaagccaggtaggaaacaatagcagc
ccaccatggtctccatcactcttagattgtttactccccgaggacaaacctgatgatgtt
gaagaaatgcaatcggcaaaggatattgactcccctaaatacttgcttcctaaagccgag
gttgtgagtcctcagggttccccattgactacagatactgaacctcccagtccacactct
agtcctttcacaaaaacagatgaacttggaactcatccagctgtgaaaacagaagatgat
gatcttcagtggtctccatcccacttagatgacttcttgataaatgaactgtcagatgac
gtgggctcggtggaagcagcgagccccgatgatgttgatcttgaagaggcgataatgatg
aagactagtgaagactatgaggaaaaggccgttgttagcttcagcaaaaagcaagtcatc
ccttttctccaagacgatgaagacaaggtcgaggataaagtaaaaccaggcagcggagaa
gctgcaaatcatattgctgaggccaaagcaaaagatgacgtgtcggcattagacaaaagc
aaatctcgcagtcctcctaaatctgagccagacctaatggctttgaccaaggccaaactg
gcaacgaagagagtaacttggaaccttcaacacaagaattcagaaaacactgaaacagaa
acatctccagttttccctctctctatcatagaggagccacgaccgcgatctcccaagcag
tgtgtccccgtgtttcccaagccgaacatctccgcttctccaaaacaaagtatcagtctt
ctggctcgacttgctgcagagtcacgatcacaactgtcaagtccgctgccttggaattct
ttagaaaaaccaactgaggatttagtttctaaactcaccagtcatgtagcagggaatgca
ccagacagacctgccaaagaggccaaacagctgccccgggttacactggagactccagtt
cagacttttccacagacccttcctccattgcctcttcctccaatattcccaccatatgct
cctgttagtgaacctgcagttccgtgtattctccagagcaacagaacaatatttagccca
actccaaagcctggtagtttggccactgctaacgaacctaaaatacaagcagccagcaca
ggtaaagacaaagggaaaacaaagtcttctaaaaaaggagagaaggtgaaaaatgacgag
tacatgaagaagctgcacatgcaggagagagctgtagaagaggtcaaactggccattaaa
cccttctatcagaagagggagatcacaaaagaggaatacaaggatatcctgcgcaaagct
gtgcagaagatttgccacagcaagagtggagaaataaacccagttaaggtggtaaatctg
gtgaaagcctatgtggacaagtacaaacacgtacgaaaacataagaagacggagtcgttg
gaggaccatgggactatgtgtgattcaccagtatga
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